Evidence map›Paper›PMID 22957200›Full record

ArticleEcology and evolution2012

Genome-wide and molecular evolution analysis of the Poplar KT/HAK/KUP potassium transporter gene family.

Caiyun He, Kai Cui, Aiguo Duan, Yanfei Zeng, Jianguo Zhang

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Characterization of HAK protein family inFrontiers in plant science · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Genome-Wide Survey and Expression Analysis of the KT/HAK/KUP Family inInternational journal of molecular sciences · 2020
    Article
  13. Article
  14. Multiple High-Affinity KPlants (Basel, Switzerland) · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Molecular Cloning and Functional Analysis of a NaFrontiers in plant science · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Caiyun HeState Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry Beijing, 100091, People's Republic of China.
Kai Cui
Aiguo Duan
Yanfei Zeng
Jianguo Zhang
Research Institute of Forestry · CNChinese Academy of Forestry · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

As the largest K(+) transport gene family, KT/HAK/KUP family plays an important role in plant growth, development, and stress adaptation. However, there is limited information about this family in woody plant species. In this study, with genome-wide in-depth investigation, 31 Poplar KT/HAK/KUP transporter genes including six pairs of tandem duplicated and eight pairs of segmental duplicated paralogs have been identified, suggesting segmental and tandem duplication events contributed to the expansion of this family in Poplar. The combination of phylogenetic, exon structure and splice site, and paragon analysis revealed 11 pairs of Poplar KT/HAK/KUP duplicates. For these 11 pairs, all pairs are subject to purify selection, and asymmetric evolutionary rates have been found to occur in three pairs. This study might provide more insights into the underlying evolution mechanisms of trees acclimating to their natural habitat.

Indexed as

Asymmetric evolutionary ratesKT/HAK/KUP familysegmental duplicationtandem duplication.

Identifiers

PMID22957200
PMCPMC3434002
OpenAlexW2136534900

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.