Evidence map›Paper›PMID 22956454›Full record

ReviewCurrent protocols in nucleic acid chemistry2012

Sequence, stability, and structure of G-quadruplexes and their interactions with drugs.

Yuwei Chen, Danzhou Yang

Abstract readReview
In one paragraph

Review in Current protocols in nucleic acid chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Poly(G)RNA biology · 2024
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yuwei ChenDepartment of Chemistry and Biochemistry, The University of Arizona, Tucson, Arizona, USA.
Danzhou Yang

Funding

G-Quadruplex-Mediated Transcriptional Regulation of PDGFR-??R01CA153821 · NCI · UNIVERSITY OF ARIZONA · PI HURLEY, LAURENCE H., YANG, DANZHOU · 2010 to 2014
$1.9M
Targeting DNA Secondary Structures for Bcl-2 Gene RegulationR01GM083117 · NIGMS · UNIVERSITY OF ARIZONA · PI YANG, DANZHOU · 2010 to 2013
$1.2M
G-quadruplexes formed in human oncogene promoters and their drug complexesR01CA122952 · NCI · UNIVERSITY OF ARIZONA · PI YANG, DANZHOU · 2007 to 2011
$875k
Acquisition of a Bruker 600MHz NMR SpectrometerS10RR016659 · NCRR · UNIVERSITY OF ARIZONA · PI YANG, DANZHOU · 2002 to 2002
$393k
NCI NIH HHS CA122952NCI NIH HHS CA153821NCI NIH HHS R01 CA122952NCI NIH HHS R01 CA153821NCRR NIH HHS 1S10RR16659NCRR NIH HHS S10 RR016659NIGMS NIH HHS GM083117NIGMS NIH HHS R01 GM083117
6 · The paper itself

Abstract

Although DNA is most widely known for its ability to store and pass along genetic information, the discovery of G-quadruplex structures has illuminated a new role for DNA in biology. DNA G-quadruplexes are four-stranded globular nucleic acid secondary structures formed in specific G-rich sequences with biological significance, such as human telomeres and oncogene promoters. This review focuses on the unimolecular DNA G-quadruplexes, which can readily form in solution under physiological conditions and are considered to be the most biologically relevant. Available structural data show a great conformational diversity of unimolecular G-quadruplexes, which are amenable to small-molecule drug targeting. The relationships between sequence, structure, and stability of unimolecular DNA G-quadruplexes, as well as the recent progress on interactions with small-molecule compounds and insights into rational design of G-quadruplex-interactive molecules, will be discussed.

Indexed as

AlkaloidsBase PairingBase SequenceDNAG-QuadruplexesHumansHydrogen BondingIndolesModels, MolecularPromoter Regions, GeneticQuinolinesTelomereAlkaloidsDNAIndolesquindolineQuinolines

Identifiers

PMID22956454
PMCPMC3463244

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.