ArticleBulletin of mathematical biology2012
Deterministic versus stochastic cell polarisation through wave-pinning.
Article in Bulletin of mathematical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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Who cites it
20 citing papers in PubMed, 55 citations in OpenAlex.
- Systems-level consequences of low RAF abundance for EGFR-ERK signaling.Biophysical journal · 2026Article
- Limits on the accuracy of contact inhibition of locomotion.Physical review. E · 2024Article
- Rho of Plants patterning: linking mathematical models and molecular diversity.Journal of experimental botany · 2024Review
- Non-asymptotic transients away from steady states determine cellular responsiveness to dynamic spatial-temporal signals.PLoS computational biology · 2023Article
- Coupling cell shape and velocity leads to oscillation and circling in keratocyte galvanotaxis.Biophysical journal · 2023Article
- Picking winners in cell-cell collisions: Wetting, speed, and contact.Physical review. E · 2022Article
- Spots, stripes, and spiral waves in models for static and motile cells : GTPase patterns in cells.Journal of mathematical biology · 2021Article
- Article
- Membrane Tension Can Enhance Adaptation to Maintain Polarity of Migrating Cells.Biophysical journal · 2020Article
- A hybrid stochastic-deterministic mechanochemical model of cell polarization.Molecular biology of the cell · 2020Article
- Rac activation is key to cell motility and directionality: An experimental and modelling investigation.Computational and structural biotechnology journal · 2019Article
- Particle-based simulations of polarity establishment reveal stochastic promotion of Turing pattern formation.PLoS computational biology · 2018Article
- Mechanisms of Cell Polarization.Current opinion in systems biology · 2017Article
- Modeling Contact Inhibition of Locomotion of Colliding Cells Migrating on Micropatterned Substrates.PLoS computational biology · 2016Article
- Mean field analysis of a spatial stochastic model of a gene regulatory network.Journal of mathematical biology · 2015Article
- Protein abundance may regulate sensitivity to external cues in polarized cells.Journal of the Royal Society, Interface · 2015Article
- GraTeLPy: graph-theoretic linear stability analysis.BMC systems biology · 2014Article
- A model for intracellular actin waves explored by nonlinear local perturbation analysis.Journal of theoretical biology · 2013Article
- Stochastic transitions in a bistable reaction system on the membrane.Journal of the Royal Society, Interface · 2013Article
- From simple to detailed models for cell polarization.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013Review
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Authors and funding
4 authors at 3 institutions in 2 countries.
Funding
Abstract
Cell polarization is an important part of the response of eukaryotic cells to stimuli, and forms a primary step in cell motility, differentiation, and many cellular functions. Among the important biochemical players implicated in the onset of intracellular asymmetries that constitute the early phases of polarization are the Rho GTPases, such as Cdc42, Rac, and Rho, which present high active concentration levels in a spatially localized manner. Rho GTPases exhibit positive feedback-driven interconversion between distinct active and inactive forms, the former residing on the cell membrane, and the latter predominantly in the cytosol. A deterministic model of the dynamics of a single Rho GTPase described earlier by Mori et al. exhibits sustained polarization by a wave-pinning mechanism. It remained, however, unclear how such polarization behaves at typically low cellular concentrations, as stochasticity could significantly affect the dynamics. We therefore study the low copy number dynamics of this model, using a stochastic kinetics framework based on the Gillespie algorithm, and propose statistical and analytic techniques which help us analyse the equilibrium behaviour of our stochastic system. We use local perturbation analysis to predict parameter regimes for initiation of polarity and wave-pinning in our deterministic system, and compare these predictions with deterministic and stochastic spatial simulations. Comparing the behaviour of the stochastic with the deterministic system, we determine the threshold number of molecules required for robust polarization in a given effective reaction volume. We show that when the molecule number is lowered wave-pinning behaviour is lost due to an increasingly large transition zone as well as increasing fluctuations in the pinning position, due to which a broadness can be reached that is unsustainable, causing the collapse of the wave, while the variations in the high and low equilibrium levels are much less affected.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.