Evidence map›Paper›PMID 22955271›Full record

ArticleThe Journal of biological chemistry2012

The transcription factors Grainyhead-like 2 and NK2-homeobox 1 form a regulatory loop that coordinates lung epithelial cell morphogenesis and differentiation.

Saaket Varma, Yuxia Cao, Jean-Bosco Tagne, Meenakshi Lakshminarayanan, Jun Li, Thomas B Friedman, Robert J Morell, David Warburton, Darrell N Kotton, Maria I Ramirez

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. GRHL2-controlled gene expression networks in luminal breast cancer.Cell communication and signaling : CCS · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Grainyhead-like (Grhl) Target Genes in Development and Cancer.International journal of molecular sciences · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Grainyhead-like 2 as a double-edged sword in development and cancer.American journal of translational research · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Saaket VarmaPulmonary Center, Department of Medicine, Boston University School of Medicine, Boston, Massachusetts 02118, USA.
Yuxia Cao
Jean-Bosco Tagne
Meenakshi Lakshminarayanan
Jun Li
Thomas B Friedman
Robert J Morell
David Warburton
Darrell N Kotton
Maria I Ramirez
Boston University · USNational Institutes of Health · USChildren's Hospital of Los Angeles · US

Funding

Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZIADC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS · 2009 to 2025
$48.7M
T1alpha in type I cell formation, regulation &functionP01HL047049 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI LU, JINING · 1992 to 2012
$27.6M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025771 · NCRR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI CENTER, DAVID M. · 2008 to 2011
$17.6M
LUNG ALVEOLAR TYPE 1 CELL MORPHOGENESISR01HL083034 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI RAMIREZ, MARIA ISABEL · 2006 to 2010
$2.3M
Mechanistic mixture models of mechanics of morphogenesis with murine measurementR01GM096195 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI LUBKIN, SHARON R · 2010 to 2013
$1.4M
Intramural NIH HHSNCRR NIH HHS UL1 RR025771NHLBI NIH HHS P01 HL047049NHLBI NIH HHS P01 HL47049NHLBI NIH HHS R01 HL083034NHLBI NIH HHS R01 HL0833034NIDCD NIH HHS DC000039-15NIGMS NIH HHS R01 GM096195
6 · The paper itself

Abstract

The Grainyhead family of transcription factors controls morphogenesis and differentiation of epithelial cell layers in multicellular organisms by regulating cell junction- and proliferation-related genes. Grainyhead-like 2 (Grhl2) is expressed in developing mouse lung epithelium and is required for normal lung organogenesis. The specific epithelial cells expressing Grhl2 and the genes regulated by Grhl2 in normal lungs are mostly unknown. In these studies we identified the NK2-homeobox 1 transcription factor (Nkx2-1) as a direct transcriptional target of Grhl2. By binding and transcriptional assays and by confocal microscopy we showed that these two transcription factors form a positive feedback loop in vivo and in cell lines and are co-expressed in lung bronchiolar and alveolar type II cells. The morphological changes observed in flattening lung alveolar type II cells in culture are associated with down-regulation of Grhl2 and Nkx2-1. Reduction of Grhl2 in lung epithelial cell lines results in lower expression levels of Nkx2-1 and of known Grhl2 target genes. By microarray analysis we identified that in addition to Cadherin1 and Claudin4, Grhl2 regulates other cell interaction genes such as semaphorins and their receptors, which also play a functional role in developing lung epithelium. Impaired collective cell migration observed in Grhl2 knockdown cell monolayers is associated with reduced expression of these genes and may contribute to the altered epithelial phenotype reported in Grhl2 mutant mice. Thus, Grhl2 functions at the nexus of a novel regulatory network, connecting lung epithelial cell identity, migration, and cell-cell interactions.

Indexed as

Cell DifferentiationMorphogenesisAlveolar Epithelial CellsAnimalsCell LineCell MovementCell ProliferationCell ShapeChromatin ImmunoprecipitationGene ExpressionGene Expression Regulation, DevelopmentalGene Regulatory NetworksLungMiceNuclear ProteinsPhalloidinegrainy head-like 2 protein, mouseNkx2-1 protein, mouseNuclear ProteinsPhalloidineThyroid Nuclear Factor 1Transcription Factors

Identifiers

PMID22955271
PMCPMC3481326
OpenAlexW1971001507

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.