Evidence map›Paper›PMID 22952876›Full record

ArticlePloS one2012

Cigarette smoking decreases global microRNA expression in human alveolar macrophages.

Joel W Graff, Linda S Powers, Anne M Dickson, Jongkwang Kim, Anna C Reisetter, Ihab H Hassan, Karol Kremens, Thomas J Gross, Mary E Wilson, Martha M Monick

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 113 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
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  12. Review
  13. MicroRNAs in Macrophages: Regulators of Activation and Function.Journal of immunology (Baltimore, Md. : 1950) · 2023
    Review
  14. Matrix Metalloproteinases in Chronic Obstructive Pulmonary Disease.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Joel W GraffDepartment of Medicine, University of Iowa, Iowa City, Iowa, USA.
Linda S Powers
Anne M Dickson
Jongkwang Kim
Anna C Reisetter
Ihab H Hassan
Karol Kremens
Thomas J Gross
Mary E Wilson
Martha M Monick
University of Iowa · US

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Brandi Janssen · 1990 to 2026
$40.5M
UNIVERSITY OF IOWA CTSA FOR PEDIATRIC RESEARCHUL1RR024979 · NCRR · UNIVERSITY OF IOWA · PI ROSENTHAL, GARY E · 2007 to 2011
$31.8M
Protective Immunity to Leishmania chagasiR01AI045540 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY E · 2001 to 2011
$3.1M
Role of EGFR in Viral Infected Lung Epithelial CellsR01HL079901 · NHLBI · UNIVERSITY OF IOWA · PI MONICK, MARTHA M · 2006 to 2010
$1.6M
Cigarette Smoke and Autophagy/Lysosomal Pathway DysfunctionR01HL096625 · NHLBI · UNIVERSITY OF IOWA · PI MONICK, MARTHA M · 2010 to 2013
$1.5M
GP63 EXPRESSION IN LEISHMANIA DONOVANI CHAGASIR01AI032135 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY EDYTHE · 1992 to 2001
$521k
A role for microRNAs in global changes in gene expression induced by LeishmaniaR21AI080801 · NIAID · UNIVERSITY OF IOWA · PI WILSON, MARY E · 2009 to 2010
$412k
Cigarette Smoking Alters the Genomic Tone of Alveolar MacrophagesR21HL109589 · NHLBI · UNIVERSITY OF IOWA · PI GROSS, THOMAS J, MONICK, MARTHA M · 2012 to 2013
$406k
NCRR NIH HHS UL1 RR024979NCRR NIH HHS UL1RR024979NHLBI NIH HHS R01 HL079901NHLBI NIH HHS R01 HL096625NHLBI NIH HHS R21 HL109589NHLBI NIH HHS R21HL109589NIAID NIH HHS R01 AI032135NIAID NIH HHS R01 AI045540NIAID NIH HHS R21 AI080801NIEHS NIH HHS P30 ES005605
6 · The paper itself

Abstract

Human alveolar macrophages are critical components of the innate immune system. Cigarette smoking-induced changes in alveolar macrophage gene expression are linked to reduced resistance to pulmonary infections and to the development of emphysema/COPD. We hypothesized that microRNAs (miRNAs) could control, in part, the unique messenger RNA (mRNA) expression profiles found in alveolar macrophages of cigarette smokers. Activation of macrophages with different stimuli in vitro leads to a diverse range of M1 (inflammatory) and M2 (anti-inflammatory) polarized phenotypes that are thought to mimic activated macrophages in distinct tissue environments. Microarray mRNA data indicated that smoking promoted an "inverse" M1 mRNA expression program, defined by decreased expression of M1-induced transcripts and increased expression of M1-repressed transcripts with few changes in M2-regulated transcripts. RT-PCR arrays identified altered expression of many miRNAs in alveolar macrophages of smokers and a decrease in global miRNA abundance. Stratification of human subjects suggested that the magnitude of the global decrease in miRNA abundance was associated with smoking history. We found that many of the miRNAs with reduced expression in alveolar macrophages of smokers were predicted to target mRNAs upregulated in alveolar macrophages of smokers. For example, miR-452 is predicted to target the transcript encoding MMP12, an important effector of smoking-related diseases. Experimental antagonism of miR-452 in differentiated monocytic cells resulted in increased expression of MMP12. The comprehensive mRNA and miRNA expression profiles described here provide insight into gene expression regulation that may underlie the adverse effects cigarette smoking has on alveolar macrophages.

Indexed as

Gene Expression RegulationAdultDatabases, GeneticDown-RegulationFemaleGene Expression ProfilingHumansMacrophages, AlveolarMaleMatrix Metalloproteinase 12MicroRNAsMiddle AgedReproducibility of ResultsRNA, MessengerSmokingTissue DonorsMatrix Metalloproteinase 12MicroRNAsMIRN452 microRNA, humanMMP12 protein, humanRNA, Messenger

Identifiers

PMID22952876
PMCPMC3430644
OpenAlexW2050620145

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.