ArticlePloS one2012
Sequencing and de novo analysis of Crassostrea angulata (Fujian oyster) from 8 different developing phases using 454 GSFlx.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Ten Candidate Genes Were Identified to Be Associated with the Great Growth Differentiation in the Three-Way Cross Hybrid Abalone.Animals : an open access journal from MDPI · 2025Article
- Population Genetics ofGenes · 2025Article
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- Proteome of larval metamorphosis induced by epinephrine in the Fujian oyster Crassostrea angulata.BMC genomics · 2020Article
- De novo transcriptome analysis of stressed blood clam (Anadara broughtonii) and identification of genes associated with hemoglobin.Genes & genomics · 2020Article
- Effects of a Sudden Drop in Salinity on Immune Response Mechanisms ofInternational journal of molecular sciences · 2019Article
- Article
- Comparative Transcriptome Analysis Reveals Molecular Basis Underlying Fast Growth of the Selectively Bred Pacific Oyster,Frontiers in genetics · 2019Article
- Transcriptomic analysis of Crassostrea sikamea × Crassostrea angulata hybrids in response to low salinity stress.PloS one · 2017Article
- De novo assembly, characterization and annotation for the transcriptome of Sarcocheilichthys sinensis.PloS one · 2017Article
- Developmental Transcriptome Analysis and Identification of Genes Involved in Larval Metamorphosis of the Razor Clam, Sinonovacula constricta.Marine biotechnology (New York, N.Y.) · 2016Article
- Differential Gene Expression during Larval Metamorphic Development in the Pearl Oyster,International journal of genomics · 2016Article
- Article
- Article
- Transcriptomics Analysis of Crassostrea hongkongensis for the Discovery of Reproduction-Related Genes.PloS one · 2015Article
- A Label-Free Proteomic Analysis on Competent Larvae and Juveniles of the Pacific Oyster Crassostrea gigas.PloS one · 2015Article
- Transcriptomic analysis of candidate osmoregulatory genes in the eastern oyster Crassostrea virginica.BMC genomics · 2014Article
- Article
- Article
- Bivalve omics: state of the art and potential applications for the biomonitoring of harmful marine compounds.Marine drugs · 2013Review
Corrections and comments
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Authors and funding
6 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Research on the mechanism for early development of shellfish, such as body plan, shell formation, settlement and metamorphosis is currently an active research field. However, studies were still limited and not deep enough because of the lack of genomic resources such as genome or transcriptome sequences. In the present research, de novo transcriptome sequencing was performed for Crassostrea angulata, the most economically important cultured oyster species in China, at eight early developmental stages using the 454 sequencing technology. A total of 555,215 reads were produced with an average length of 309 nucleotides that were then assembled into 10,462 contigs. As determined by GO annotation and KEGG pathway mapping, functional annotation of the unigenes recovered diverse biological functions and processes. Six unique sequences related to settlement, metamorphosis and growth were subsequently analyzed by real-time PCR. Given the lack of whole genome information for oysters, transcriptome and de novo analysis of C. angulata from the eight different developing phases will provide important and useful information on early development mechanism and help genetic breeding of shellfish.
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