Evidence map›Paper›PMID 22952453›Full record

ArticlePLoS genetics2012

Ccdc94 protects cells from ionizing radiation by inhibiting the expression of p53.

Shelly Sorrells, Seth Carbonneau, Erik Harrington, Aye T Chen, Bridgid Hast, Brett Milash, Ujwal Pyati, Michael B Major, Yi Zhou, Leonard I Zon and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Evolutionary adaptation revealed by comparative genome analysis of woolly mammoths and elephants.DNA research : an international journal for rapid publication of reports on genes and genomes · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Shelly SorrellsDepartment of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah, United States of America.
Seth Carbonneau
Erik Harrington
Aye T Chen
Bridgid Hast
Brett Milash
Ujwal Pyati
Michael B Major
Yi Zhou
Leonard I Zon
Rodney A Stewart
A Thomas Look
Cicely Jette
Huntsman Cancer Institute · USBoston Children's Hospital · USHarvard University · USDana-Farber Cancer Institute · USUNC Lineberger Comprehensive Cancer CenterUniversity of North Carolina at Chapel Hill · USUniversity of Utah · US

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
Cancer Biology in the ZebrafishR01CA103846 · NCI · CHILDREN'S HOSPITAL BOSTON · PI ZON, LEONARD IRA · 2003 to 2022
$7.5M
TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
Genetic Modifiers of the Anti-apoptotic Functions of Bcl-2R01CA119066 · NCI · DANA-FARBER CANCER INST · PI LOOK, A. THOMAS · 2006 to 2010
$1.9M
K99 to R00 Transition-Neural Crest Migration and Survival in ZebrafishR00NS058608 · NINDS · UNIVERSITY OF UTAH · PI STEWART, RODNEY A. · 2009 to 2011
$747k
Genetic Modifiers of the Anti-apoptotic Functions of Bcl-2K01DK074555 · NIDDK · UNIVERSITY OF UTAH · PI JETTE, CICELY ANNE · 2006 to 2010
$666k
Neural Crest Cell Survival and Migration in ZebrafishK99NS058608 · NINDS · DANA-FARBER CANCER INST · PI STEWART, RODNEY A. · 2007 to 2008
$180k
NCI NIH HHS NIH 3R01CA119066NCI NIH HHS P30 CA042014NCI NIH HHS R01 CA103846NCI NIH HHS R01 CA119066NIDDK NIH HHS K01 DK074555NIDDK NIH HHS NIH K01 DK074555NIGMS NIH HHS T32 GM007464NINDS NIH HHS K99 NS058608NINDS NIH HHS NS058608NINDS NIH HHS R00 NS058608
6 · The paper itself

Abstract

DNA double-strand breaks (DSBs) represent one of the most deleterious forms of DNA damage to a cell. In cancer therapy, induction of cell death by DNA DSBs by ionizing radiation (IR) and certain chemotherapies is thought to mediate the successful elimination of cancer cells. However, cancer cells often evolve to evade the cytotoxicity induced by DNA DSBs, thereby forming the basis for treatment resistance. As such, a better understanding of the DSB DNA damage response (DSB-DDR) pathway will facilitate the design of more effective strategies to overcome chemo- and radioresistance. To identify novel mechanisms that protect cells from the cytotoxic effects of DNA DSBs, we performed a forward genetic screen in zebrafish for recessive mutations that enhance the IR-induced apoptotic response. Here, we describe radiosensitizing mutation 7 (rs7), which causes a severe sensitivity of zebrafish embryonic neurons to IR-induced apoptosis and is required for the proper development of the central nervous system. The rs7 mutation disrupts the coding sequence of ccdc94, a highly conserved gene that has no previous links to the DSB-DDR pathway. We demonstrate that Ccdc94 is a functional member of the Prp19 complex and that genetic knockdown of core members of this complex causes increased sensitivity to IR-induced apoptosis. We further show that Ccdc94 and the Prp19 complex protect cells from IR-induced apoptosis by repressing the expression of p53 mRNA. In summary, we have identified a new gene regulating a dosage-sensitive response to DNA DSBs during embryonic development. Future studies in human cancer cells will determine whether pharmacological inactivation of CCDC94 reduces the threshold of the cancer cell apoptotic response.

Indexed as

ZebrafishAnimalsApoptosisDNA Breaks, Double-StrandedEmbryonic DevelopmentGene Expression RegulationGenes, RecessiveMutationNeuronsRadiation, IonizingRadiation ToleranceTumor Suppressor Protein p53Zebrafish Proteinstp53 protein, zebrafishTumor Suppressor Protein p53yju2 protein, zebrafishZebrafish Proteins

Identifiers

PMID22952453
PMCPMC3431329
OpenAlexW2160610284

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.