Evidence map›Paper›PMID 22952051›Full record

ArticleGenes and immunity2012

Activation of innate anti-viral immune response genes in symptomatic benign prostatic hyperplasia.

A A Madigan, K M Sobek, J L Cummings, W R Green, D J Bacich, D S O'Keefe

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  7. DNA methylation in development and disease: an overview for prostate researchers.American journal of clinical and experimental urology · 2018
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

A A MadiganDepartment of Urology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15232, USA.
K M Sobek
J L Cummings
W R Green
D J Bacich
D S O'Keefe
University of Pittsburgh · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Leonard J. Appleman · 1988 to 2026
$158.0M
Urologic Training Program for Physicians and ScientistsT32DK007774 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WANG, ZHOU · 1999 to 2014
$2.3M
Folate and PSMA Interact to Regulate DNA Methylation and Prostate CarcinogenesisR01CA138444 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI BACICH, DEAN JOHN, O'KEEFE, DENISE SUSAN · 2010 to 2014
$1.5M
NCI NIH HHS P30 CA047904NCI NIH HHS P30CA047904NCI NIH HHS R01 CA138444NCI NIH HHS R01CA138444NIDDK NIH HHS T32 5T32DK007774-12NIDDK NIH HHS T32 DK007774NIDDK NIH HHS T32DK007774
6 · The paper itself

Abstract

Benign prostatic hyperplasia (BPH) is the most common urologic disease in men over age 50. Symptoms include acute urinary retention, urgency to urinate and nocturia. For patients with severe symptoms, surgical treatment is used to remove the affected tissue. Interestingly, the presence of histologic BPH does not always correlate with symptoms. The molecular basis of symptomatic BPH and how it differs from asymptomatic BPH is unknown. Investigation into the molecular players involved in symptomatic BPH will likely give insight into novel therapeutic, and potentially preventative, targets. We determined the expression of genes involved in the innate anti-viral immune response in tissues from patients undergoing surgery to alleviate the symptoms of BPH, and compared the results with prostate tissue with histologic BPH, but from patients with few urinary issues (asymptomatic BPH). We found that expression of complement factor I, apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like protein 3G, oligoadenylate synthetase 2 and interferon-induced tetratricopeptide 1, four genes whose protein products are involved in the innate anti-viral immune response, was significantly transcriptionally upregulated in symptomatic BPH. Additionally, we observe hypomethylation and concomitant expression of ancient retroviral-like sequences, the long interspersed nuclear element 1 retrotransposons, in symptomatic BPH when compared with normal prostate tissue. These findings merit further investigation into the anti-viral immune response in symptomatic BPH.

Indexed as

Adaptor Proteins, Signal TransducingAPOBEC-3G DeaminaseCarrier ProteinsComplement Factor ICytidine DeaminaseDNA MethylationHumansImmunity, InnateLong Interspersed Nucleotide ElementsMaleProstatic HyperplasiaRNA-Binding ProteinsRNA, MessengerUp-RegulationAdaptor Proteins, Signal TransducingAPOBEC-3G DeaminaseAPOBEC3G protein, humanCarrier ProteinsCFI protein, humanComplement Factor ICytidine DeaminaseIFIT1 protein, humanRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID22952051
PMCPMC3475748
OpenAlexW2033375782

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.