Evidence map›Paper›PMID 22950601›Full record

ArticleAnalytical chemistry2012

Limited proteolysis via millisecond digestions in protease-modified membranes.

Yu-Jing Tan, Wei-Han Wang, Yi Zheng, Jinlan Dong, Giovanni Stefano, Federica Brandizzi, R Michael Garavito, Gavin E Reid, Merlin L Bruening

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Electroblotting through Enzymatic Membranes to Enhance Molecular Tissue Imaging.Journal of the American Society for Mass Spectrometry · 2021
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yu-Jing TanDepartment of Chemistry, Michigan State University, East Lansing, Michigan 48824, USA.
Wei-Han Wang
Yi Zheng
Jinlan Dong
Giovanni Stefano
Federica Brandizzi
R Michael Garavito
Gavin E Reid
Merlin L Bruening
Michigan State University · US

Funding

RAPID PROTEIN PURIFICATION BY POLYMER BRUSH-MODIFIED MEMBRANESR01GM080511 · NIGMS · MICHIGAN STATE UNIVERSITY · PI BRUENING, MERLIN L · 2008 to 2011
$986k
NIGMS NIH HHS GM 080511NIGMS NIH HHS R01 GM080511
6 · The paper itself

Abstract

Sequential adsorption of poly(styrene sulfonate) (PSS) and proteases in porous nylon yields enzymatic membrane reactors for limited protein digestion. Although a high local enzyme density (~30 mg/cm(3)) and small pore diameters in the membrane lead to digestion in <1 s, the low membrane thickness (170 μm) affords control over residence times at the millisecond level to limit digestion. Apomyoglobin digestion demonstrates that peptide lengths increase as the residence time in the membrane decreases. Moreover, electron transfer dissociation (ETD) tandem mass spectrometry (MS/MS) on a large myoglobin proteolytic peptide (8 kDa) provides a resolution of 1-2 amino acids. Under denaturing conditions, limited membrane digestion of bovine serum albumin (BSA) and subsequent ESI-Orbitrap MS analysis reveal large peptides (3-10 kDa) that increase the sequence coverage from 53% (2 s digestion) to 82% (0.05 s digestion). With this approach, we also performed membrane-based limited proteolysis of a large Arabidopsis GTPase, Root Hair Defective 3 (RHD3) and showed suitable probing for labile regions near the C-terminus to suggest what protein reconstruction might make RHD3 more suitable for crystallization.

Indexed as

ProteolysisAdsorptionAnimalsApoproteinsArabidopsisCattleGTP PhosphohydrolasesModels, MolecularMyoglobinNylonsPeptide HydrolasesPeptidesPolystyrenesPorositySerum Albumin, BovineSurface PropertiesapomyoglobinApoproteinsGTP PhosphohydrolasesMyoglobinNylonsPeptide HydrolasesPeptidesPolystyrenespolystyrene sulfonic acidSerum Albumin, Bovine

Identifiers

PMID22950601
PMCPMC3683959
OpenAlexW1975174965

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.