Evidence map›Paper›PMID 22949863›Full record

ReviewInternational journal of molecular sciences2012

Molecular tools for exploring polyploid genomes in plants.

Riccardo Aversano, Maria Raffaella Ercolano, Immacolata Caruso, Carlo Fasano, Daniele Rosellini, Domenico Carputo

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Apple Autotetraploids with Enhanced Resistance to Apple Scab (International journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Riccardo AversanoDepartment of Soil, Plant, Environmental and Animal Production Sciences, University of Naples Federico II, Via Università 100, Portici 80055, Italy.
Maria Raffaella ErcolanoDepartment of Soil, Plant, Environmental and Animal Production Sciences, University of Naples Federico II, Via Università 100, Portici 80055, Italy.
Immacolata CarusoDepartment of Soil, Plant, Environmental and Animal Production Sciences, University of Naples Federico II, Via Università 100, Portici 80055, Italy.
Carlo FasanoDepartment of Soil, Plant, Environmental and Animal Production Sciences, University of Naples Federico II, Via Università 100, Portici 80055, Italy.
Daniele RoselliniDepartment of Applied Biology, University of Perugia, Borgo XX Giugno 74, Perugia 06121, Italy.
Domenico CarputoDepartment of Soil, Plant, Environmental and Animal Production Sciences, University of Naples Federico II, Via Università 100, Portici 80055, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyploidy is a very common phenomenon in the plant kingdom, where even diploid species are often described as paleopolyploids. The polyploid condition may bring about several advantages compared to the diploid state. Polyploids often show phenotypes that are not present in their diploid progenitors or exceed the range of the contributing species. Some of these traits may play a role in heterosis or could favor adaptation to new ecological niches. Advances in genomics and sequencing technology may create unprecedented opportunities for discovering and monitoring the molecular effects of polyploidization. Through this review, we provide an overview of technologies and strategies that may allow an in-depth analysis of polyploid genomes. After introducing some basic aspects on the origin and genetics of polyploids, we highlight the main tools available for genome and gene expression analysis and summarize major findings. In the last part of this review, the implications of next generation sequencing are briefly discussed. The accumulation of knowledge on polyploid formation, maintenance, and divergence at whole-genome and subgenome levels will not only help plant biologists to understand how plants have evolved and diversified, but also assist plant breeders in designing new strategies for crop improvement.

Indexed as

Genome, PlantPolyploidyGenomicsHigh-Throughput Nucleotide SequencingPhenotypePlantsgene expressiongenome doublingmicroarraysmolecular markersnext generation sequencingtranscriptomics

Identifiers

PMID22949863
PMCPMC3431861

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.