Evidence map›Paper›PMID 22949715›Full record

ArticleCold Spring Harbor protocols2012

Circuit mapping by ultraviolet uncaging of glutamate.

Gordon M G Shepherd

Open access · greenAbstract read
In one paragraph

Article in Cold Spring Harbor protocols, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Thalamocortical and Intracortical Inputs Differentiate Layer-Specific Mouse Auditory Corticocollicular Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  8. Article
  9. Two-Photon Uncaging of Glutamate.Frontiers in synaptic neuroscience · 2018
    Review
  10. Article
  11. Article
  12. Mapping Auditory Synaptic Circuits with Photostimulation of Caged Glutamate.Methods in molecular biology (Clifton, N.J.) · 2016
    Article
  13. Article
  14. Article
  15. Synaptic circuit organization of motor corticothalamic neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Laminarly orthogonal excitation of fast-spiking and low-threshold-spiking interneurons in mouse motor cortex.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Gordon M G Shepherd

Funding

Synaptic Circuit Organization of Motor CortexR01NS061963 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHEPHERD, GORDON M · 2008 to 2022
$5.4M
Open source software for laser scanning microscopyR01EB001464 · NIBIB · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SHEPHERD, GORDON M · 2003 to 2010
$2.1M
Synaptic circuit organization of motor cortexR37NS061963 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Gordon M Shepherd · 2024 to 2026
$1.6M
NIBIB NIH HHS EB001464NIBIB NIH HHS R01 EB001464NINDS NIH HHS NS061963NINDS NIH HHS R01 NS061963NINDS NIH HHS R37 NS061963
6 · The paper itself

Abstract

In laser photostimulation, small clusters of neurons in brain slices are induced to fire action potentials by focal glutamate uncaging, and synaptic connectivity between photoexcited presynaptic neurons and individual postsynaptic neurons is assessed by intracellular recording of synaptic events. With a scanner, this process can be repeated sequentially across a patterned array of stimulus locations, generating maps of neurons' local sources of synaptic inputs. Laser scanning photostimulation (LSPS) based on patterned glutamate uncaging offers an efficient, quantitative, optical-electrophysiological way to map synaptic circuits in brain slices. The efficacy of glutamate-based photostimulation for circuit mapping (in contrast to electrical stimulation) derives from the ability to stimulate neurons with high precision and speed, and without stimulating axons of passage. This protocol describes the components, assembly, and operation of a laser scanning microscope for ultraviolet (UV) uncaging, along with experimental methods for circuit mapping in brain slices. It presents a general approach and a set of guidelines for quantitative circuit mapping using "standard" LSPS methods based on single-photon glutamate uncaging using a UV laser, a pair of scanning mirror galvanometers, a patch-clamp setup, and open-source data acquisition software.

Indexed as

AnimalsBrainBrain MappingGlutamatesMiceMicroscopy, ConfocalNeuronsPhotic StimulationSynapsesUltraviolet RaysGlutamates

Identifiers

PMID22949715
PMCPMC4120105
OpenAlexW2106016332

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.