Evidence map›Paper›PMID 22944195›Full record

ArticleDevelopmental biology2012

Eif4a3 is required for accurate splicing of the Xenopus laevis ryanodine receptor pre-mRNA.

Tomomi Haremaki, Daniel C Weinstein

Abstract read
In one paragraph

Article in Developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

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  9. The exon junction complex as a node of post-transcriptional networks.Nature reviews. Molecular cell biology · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tomomi HaremakiQueens College of the City University of New York, Biology Department, 65-30 Kissena Boulevard, Flushing, NY 11367, USA.
Daniel C Weinstein
Queens College, CUNY · US

Funding

Signaling Mechanisms in Vertebrate Mesoderm InductionR01GM061671 · NIGMS · QUEENS COLLEGE · PI WEINSTEIN, DANIEL · 2001 to 2010
$2.7M
NIGMS NIH HHS R01 GM061671NIGMS NIH HHS R01-GM61671
6 · The paper itself

Abstract

The Exon Junction Complex (EJC) plays a critical role in multiple posttranscriptional events, including RNA subcellular localization, nonsense-mediated decay (NMD), and translation. We previously reported that knockdown of the EJC core component Eukaryotic initiation factor 4a3 (Eif4a3) results in full-body paralysis of embryos of the frog, Xenopus laevis. Here, we explore the cellular and molecular mechanisms underlying this phenotype. We find that cultured muscle cells derived from Eif4a3 morphants do not contract, and fail to undergo calcium-dependent calcium release in response to electrical stimulation or treatment with caffeine. We show that ryr (ryanodine receptor) transcripts are incorrectly spliced in Eif4a3 morphants, and demonstrate that inhibition of Xenopus Ryr function similarly results in embryonic paralysis. These results suggest that the EJC mediates muscle cell function via regulation of pre-mRNA splicing during early vertebrate embryogenesis.

Indexed as

RNA SplicingAnimalsEukaryotic Initiation Factor-4AExonsNonsense Mediated mRNA DecayRNA PrecursorsRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumXenopusXenopus laevisXenopus ProteinsEukaryotic Initiation Factor-4ARNA PrecursorsRyanodine Receptor Calcium Release ChannelXenopus Proteins

Identifiers

PMID22944195
PMCPMC3479368
OpenAlexW2135655992

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.