Evidence map›Paper›PMID 22942286›Full record

ArticleThe Journal of biological chemistry2012

Phosphatidylinositol 3-kinase and Rab5 GTPase inversely regulate the Smad anchor for receptor activation (SARA) protein independently of transforming growth factor-β1.

Constance E Runyan, Zongyi Liu, H William Schnaper

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
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  4. Review
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  6. Review
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  8. Review
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  10. Identification of Polysaccharides FromFrontiers in pharmacology · 2022
    Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Constance E RunyanDepartment of Pediatrics, Northwestern University, Chicago, Illinois 60611, USA. c-runyan@northwestern.edu
Zongyi Liu
H William Schnaper
Northwestern University · US

Funding

Signaling Pathways in Renal FibrogenesisR01DK049362 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SCHNAPER, H WILLIAM · 1994 to 2014
$4.0M
Adaptor Molecules in TGF-beta SignalingR01DK075663 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SCHNAPER, H WILLIAM · 2008 to 2012
$1.5M
Signaling Pathways in Renal FibrogenesisR56DK049362 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SCHNAPER, H WILLIAM · 2008 to 2008
$258k
NIDDK NIH HHS R01 DK049362NIDDK NIH HHS R01 DK075663NIDDK NIH HHS R56 DK049362
6 · The paper itself

Abstract

SARA has been shown to be a regulator of epithelial cell phenotype, with reduced expression during TGF-β1-mediated epithelial-to-mesenchymal transition. Examination of the pathways that might play a role in regulating SARA expression identified phosphatidylinositol 3-kinase (PI3K) pathway inhibition as sufficient to reduce SARA expression. The mechanism of PI3K inhibition-mediated SARA down-regulation differs from that induced by TGF-β1 in that, unlike TGF-β1, PI3K-dependent depletion of SARA was apparent within 6 h and did not occur at the mRNA or promoter level but was blocked by inhibition of proteasome-mediated degradation. This effect was independent of Akt activity because neither reducing nor enhancing Akt activity modulated the expression of SARA. Therefore, this is likely a direct effect of p85α action, and co-immunoprecipitation of SARA and p85α confirmed that these proteins interact. Both SARA and PI3K have been shown to be associated with endosomes, and either LY294002 or p85α knockdown enlarged SARA-containing endocytic vesicles. Inhibition of clathrin-mediated endocytosis blocked SARA down-regulation, and a localization-deficient mutant SARA was protected against down-regulation. As inhibiting PI3K can activate the endosomal fusion-regulatory small GTPase Rab5, we expressed GTPase-deficient Rab5 and observed endosomal enlargement and reduced SARA protein expression, similar to that seen with PI3K inhibition. Importantly, either interference with PI3K via LY294002 or p85α knockdown, or constitutive activity of the Rab5 pathway, enhanced the expression of smooth muscle α-actin. Together, these data suggest that although TGF-β1 can induce epithelial-to-mesenchymal transition through reduction in SARA expression, SARA is also basally regulated by its interaction with PI3K.

Indexed as

ActinsCell LineChromonesClass Ia Phosphatidylinositol 3-KinaseEndocytosisEnzyme InhibitorsEpithelial-Mesenchymal TransitionGene Expression RegulationGene Knockdown TechniquesHumansIntracellular Signaling Peptides and ProteinsMorpholinesPhosphoinositide-3 Kinase InhibitorsProteasome Endopeptidase ComplexProteolysisProto-Oncogene Proteins c-akt2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneActinsChromonesClass Ia Phosphatidylinositol 3-KinaseEnzyme InhibitorsIntracellular Signaling Peptides and ProteinsMorpholinesPhosphoinositide-3 Kinase InhibitorsProteasome Endopeptidase ComplexProto-Oncogene Proteins c-aktrab5 GTP-Binding ProteinsSerine EndopeptidasesTransforming Growth Factor beta1ZFYVE16 protein, human

Identifiers

PMID22942286
PMCPMC3476251
OpenAlexW2075464033

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.