Evidence map›Paper›PMID 22940846›Full record

ArticleVirus genes2012

Influence of copy number on the expression levels of pandemic influenza hemagglutinin recombinant protein in methylotrophic yeast Pichia pastoris.

T N Athmaram, Shweta Saraswat, Anil Kumar Singh, M Kameswara Rao, N Gopalan, V V S Suryanarayana, P V L Rao

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Article in Virus genes, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

T N AthmaramDivision of Virology, Defence Research and Development Establishment, Ministry of Defence, Govt. of India, Gwalior, MP, India. athmabiotech@gmail.com
Shweta Saraswat
Anil Kumar Singh
M Kameswara Rao
N Gopalan
V V S Suryanarayana
P V L Rao
Ministry of Defence · INDefence Research and Development Establishment · INIndian Veterinary Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The hemagglutinin (HA) gene of novel Swine Origin Influenza A/California/04/2009 (H1N1) was engineered for expression in Pichia pastoris as a soluble secreted protein. The full length HA-synthetic gene having α secretory tag under the control of AOX1 promoter was integrated into P. pastoris genome through homologous recombination. The resultant Pichia clones having single and multiple copy integrants of the expression cassettes were screened for the expression of full length HA protein in the culture supernatant. In order to completely exploit the expression potential of the P. pastoris expression system, a systematic investigation on the influence of gene copy number on the expression of the recombinant protein was made. A panel of Pichia clones carrying increasing copies of the heterologous gene was selected based on Geneticin resistance and SYBR green-based quantitative real-time PCR approach. Using these strategies, recombinant Pichia transformants carrying up to a maximum of four to six copies of the transgene were identified. After optimising the expression conditions for shaker flask culture, the resultant clones demonstrated that the increase in copy number results in a proportional elevation in the expression level of H1N1HA recombinant protein. Our findings clearly suggest that the gene dosage effect play a vital role in high level expression of the pandemic Influenza HA protein in yeast system.

Indexed as

Gene DosageGenes, ViralCloning, MolecularElectrophoresis, Polyacrylamide GelGene Expression Regulation, FungalGenetic VectorsHemagglutinin Glycoproteins, Influenza VirusHomologous RecombinationInfluenza A Virus, H1N1 SubtypeMicrobial Sensitivity TestsOrganisms, Genetically ModifiedPichiaRecombinant ProteinsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTransformation, GeneticTransgenesH1N1 virus hemagglutininHemagglutinin Glycoproteins, Influenza VirusRecombinant Proteins

Identifiers

PMID22940846
OpenAlexW2046078629

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.