Evidence map›Paper›PMID 22936624›Full record

ArticleProtein science : a publication of the Protein Society2012

Solution structure of a tethered Lmo2(LIM2) /Ldb1(LID) complex.

Siavoush Dastmalchi, Lorna Wilkinson-White, Ann H Kwan, Roland Gamsjaeger, Joel P Mackay, Jacqueline M Matthews

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Biochemical Feature of LMO2 Interactome and LMO2 Function Prospect.Medical science monitor basic research · 2020
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. LIM-domain-only proteins in cancer.Nature reviews. Cancer · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Siavoush DastmalchiSchool of Molecular Bioscience, University of Sydney, Sydney, New South Wales 2006, Australia.
Lorna Wilkinson-White
Ann H Kwan
Roland Gamsjaeger
Joel P Mackay
Jacqueline M Matthews
University of Sydney · AUWestern Sydney University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LIM-only protein 2, Lmo2, is a regulatory protein that is essential for hematopoietic development and inappropriate overexpression of Lmo2 in T-cells contributes to T-cell leukemia. It exerts its functions by mediating protein-protein interactions and nucleating multicomponent transcriptional complexes. Lmo2 interacts with LIM domain binding protein 1 (Ldb1) through the tandem LIM domains of Lmo2 and the LIM interaction domain (LID) of Ldb1. Here, we present the solution structure of the LIM2 domain of Lmo2 bound to Ldb1(LID) . The ordered regions of Ldb1 in this complex correspond well with binding hotspots previously defined by mutagenic studies. Comparisons of this Lmo2(LIM2) -Ldb1(LID) structure with previously determined structures of the Lmo2/Ldb1(LID) complexes lead to the conclusion that modular binding of tandem LIM domains in Lmo2 to tandem linear motifs in Ldb1 is accompanied by several disorder-to-order transitions and/or conformational changes in both proteins.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsDNA-Binding ProteinsLIM Domain ProteinsMiceModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein ConformationProtein Structure, TertiaryRecombinant ProteinsAdaptor Proteins, Signal TransducingDNA-Binding ProteinsLdb1 protein, mouseLIM Domain ProteinsLmo2 protein, mouseRecombinant Proteins

Identifiers

PMID22936624
PMCPMC3527713
OpenAlexW2147637717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.