Evidence map›Paper›PMID 22936568›Full record

ArticleScience (New York, N.Y.)2012

A high-coverage genome sequence from an archaic Denisovan individual.

Matthias Meyer, Martin Kircher, Marie-Theres Gansauge, Heng Li, Fernando Racimo, Swapan Mallick, Joshua G Schraiber, Flora Jay, Kay Prüfer, Cesare de Filippo and 24 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 898 papers.

0numbers the graph read from it
0cells of the map it votes in
898citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

898 citing papers in PubMed.

  1. Ancient DNA and Human Physiology.Physiology (Bethesda, Md.) · 2026
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  19. Metagenomic peek into a corn mummy.Scientific reports · 2026
    Article
  20. Article

838 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors.

Matthias MeyerDepartment of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, D-04103 Leipzig, Germany. mmeyer@eva.mpg.de
Martin Kircher
Marie-Theres Gansauge
Heng Li
Fernando Racimo
Swapan Mallick
Joshua G Schraiber
Flora Jay
Kay Prüfer
Cesare de Filippo
Peter H Sudmant
Can Alkan
Qiaomei Fu
Ron Do
Nadin Rohland
Arti Tandon
Michael Siebauer
Richard E Green
Katarzyna Bryc
Adrian W Briggs
Udo Stenzel
Jesse Dabney
Jay Shendure
Jacob Kitzman
Michael F Hammer
Michael V Shunkov
Anatoli P Derevianko
Nick Patterson
Aida M Andrés
Evan E Eichler
Montgomery Slatkin
David Reich
Janet Kelso
Svante Pääbo

Funding

MODELS OF COMPLEX GENETIC SYSTEMSR01GM040282 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SLATKIN, MONTGOMERY WILSON · 1988 to 2017
$4.4M
Population mixture in evolutionary and medical geneticsR01GM100233 · NIGMS · HARVARD MEDICAL SCHOOL · PI PATTERSON, NICK J, REICH, DAVID E · 2012 to 2019
$2.7M
Howard Hughes Medical InstituteNIGMS NIH HHS GM100233NIGMS NIH HHS R01 GM040282NIGMS NIH HHS R01 GM100233NIGMS NIH HHS R01-GM40282
6 · The paper itself

Abstract

We present a DNA library preparation method that has allowed us to reconstruct a high-coverage (30×) genome sequence of a Denisovan, an extinct relative of Neandertals. The quality of this genome allows a direct estimation of Denisovan heterozygosity indicating that genetic diversity in these archaic hominins was extremely low. It also allows tentative dating of the specimen on the basis of "missing evolution" in its genome, detailed measurements of Denisovan and Neandertal admixture into present-day human populations, and the generation of a near-complete catalog of genetic changes that swept to high frequency in modern humans since their divergence from Denisovans.

Indexed as

Genetic VariationHeterozygoteAllelesAnimalsBase SequenceFossilsGene FlowGene LibraryGenome, HumanHumansMolecular Sequence DataNeanderthalsSequence Analysis, DNA

Identifiers

PMID22936568
PMCPMC3617501

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.