Evidence map›Paper›PMID 22936328›Full record

ArticlePlant molecular biology2012

Genome-wide analysis of lectin receptor-like kinase family from Arabidopsis and rice.

Neha Vaid, Prashant Kumar Pandey, Narendra Tuteja

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Article in Plant molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
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  5. A lectin receptor-like kinase controls self-pollen recognition inProceedings of the National Academy of Sciences of the United States of America · 2026
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  14. Genome-Wide Identification of the Lectin Receptor-like Kinase Gene Family inInternational journal of molecular sciences · 2024
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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 4 countries.

Neha VaidInternational Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, New Delhi, India.
Prashant Kumar Pandey
Narendra Tuteja
International Centre for Genetic Engineering and Biotechnology · ITMax Planck Institute of Molecular Plant Physiology · DENational Center for Genetic Engineering and Biotechnology · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lectin receptor-like kinases (LecRLKs) are class of membrane proteins found in higher plants that are involved in diverse functions ranging from plant growth and development to stress tolerance. The basic structure of LecRLK protein comprises of a lectin and a kinase domain, which are interconnected by transmembrane region. Here we have identified LecRLKs from Arabidopsis and rice and studied these proteins on the basis of their expression profile and phylogenies. We were able to identify 32 G-type, 42 L-type and 1 C-type LecRLKs from Arabidopsis and 72 L-type, 100 G-type and 1 C-type LecRLKs from rice on the basis of their annotation and presence of lectin as well kinase domains. The whole family is rather intron-less. We have sub-grouped the gene family on the basis of their phylogram. Although on the basis of sequence the members of each group are closely associated but their functions vary to a great extent. The interacting partners and coexpression data of the genes revealed the importance of gene family in physiology and stress related responses. An in-depth analysis on gene-expression suggested clear demarcation in roles assigned to each gene. To gain additional knowledge about the LecRLK gene family, we searched for previously unreported motifs and checked their importance structurally on the basis of homology modelling. The analysis revealed that the gene family has important roles in diverse functions in plants, both in the developmental stages and in stress conditions. This study thus opens the possibility to explore the roles that LecRLKs might play in life of a plant.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsChromosome MappingConserved SequenceGene Expression ProfilingGenome-Wide Association StudyModels, MolecularMolecular Sequence DataOryzaPhylogenyProtein Serine-Threonine KinasesArabidopsis ProteinsATHLECRK protein, ArabidopsisProtein Serine-Threonine Kinases

Identifiers

PMID22936328
OpenAlexW2131376338

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.