Evidence map›Paper›PMID 22935612›Full record

ArticleCell death and differentiation2013

Identification of factors that function in Drosophila salivary gland cell death during development using proteomics.

C K McPhee, B M Balgley, C Nelson, J H Hill, Y Batlevi, X Fang, C S Lee, E H Baehrecke

Open access · bronzeAbstract read
In one paragraph

Article in Cell death and differentiation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. I Spy in the Developing Fly a Multitude of Ways to Die.Journal of developmental biology · 2018
    Review
  6. Life, death and autophagy.Nature cell biology · 2018
    Review
  7. Mutants forG3 (Bethesda, Md.) · 2017
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

C K McPheeDepartment of Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA.
B M Balgley
C Nelson
J H Hill
Y Batlevi
X Fang
C S Lee
E H Baehrecke
University of Massachusetts Chan Medical School · USUniversity of Maryland, College Park · USBioproximity (United States) · US

Funding

PILOT AND FEASIBILITY PROGRAMP30DK032520 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CZECH, MICHAEL P · 1986 to 2010
$14.6M
Genetic Regulation of Autophagic Cell DeathR01GM079431 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BAEHRECKE, ERIC H · 2007 to 2019
$4.4M
NIDDK NIH HHS DK32520NIDDK NIH HHS P30 DK032520NIGMS NIH HHS GM079431NIGMS NIH HHS R01 GM079431
6 · The paper itself

Abstract

Proteasome inhibitors induce cell death and are used in cancer therapy, but little is known about the relationship between proteasome impairment and cell death under normal physiological conditions. Here, we investigate the relationship between proteasome function and larval salivary gland cell death during development in Drosophila. Drosophila larval salivary gland cells undergo synchronized programmed cell death requiring both caspases and autophagy (Atg) genes during development. Here, we show that ubiquitin proteasome system (UPS) function is reduced during normal salivary gland cell death, and that ectopic proteasome impairment in salivary gland cells leads to early DNA fragmentation and salivary gland condensation in vivo. Shotgun proteomic analyses of purified dying salivary glands identified the UPS as the top category of proteins enriched, suggesting a possible compensatory induction of these factors to maintain proteolysis during cell death. We compared the proteome following ectopic proteasome impairment to the proteome during developmental cell death in salivary gland cells. Proteins that were enriched in both populations of cells were screened for their function in salivary gland degradation using RNAi knockdown. We identified several factors, including trol, a novel gene CG11880, and the cop9 signalsome component cop9 signalsome 6, as required for Drosophila larval salivary gland degradation.

Indexed as

ProteomicsAnimalsApoptosisCOP9 Signalosome ComplexDNA FragmentationDrosophilaDrosophila ProteinsHeparan Sulfate ProteoglycansLarvaMultiprotein ComplexesPeptide HydrolasesProteasome Endopeptidase ComplexProteomeRNA InterferenceRNA, Small InterferingSalivary GlandsCOP9 Signalosome ComplexDrosophila ProteinsHeparan Sulfate ProteoglycansMultiprotein ComplexesPeptide HydrolasesProteasome Endopeptidase ComplexProteomeRNA, Small Interferingtrol protein, DrosophilaUbiquitins

Identifiers

PMID22935612
PMCPMC3554341
OpenAlexW1989619673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.