Evidence map›Paper›PMID 22934582›Full record

ReviewCurrent drug targets2012

Analysis of current antifungal agents and their targets within the Pneumocystis carinii genome.

Aleksey Porollo, Jaroslaw Meller, Yogesh Joshi, Vikash Jaiswal, A George Smulian, Melanie T Cushion

Open access · bronzeAbstract readReview
In one paragraph

Review in Current drug targets, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Ibrexafungerp: A narrative overview.Current research in microbial sciences · 2024
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Chloroquine Analogues as Leads against Pneumocystis Lung Pathogens.Antimicrobial agents and chemotherapy · 2018
    Article
  10. Article
  11. Article
  12. Special Issue: Novel Antifungal Drug Discovery.Journal of fungi (Basel, Switzerland) · 2016
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Aleksey PorolloDepartment of Environmental Health, University of Cincinnati, Cincinnati, OH 45267-0056, USA. alexey.porollo@uc.edu
Jaroslaw Meller
Yogesh Joshi
Vikash Jaiswal
A George Smulian
Melanie T Cushion
University of Cincinnati Medical Center · USCincinnati Health Department · US

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
Biofilm Formation by PneumocystisR01AI076104 · NIAID · UNIVERSITY OF CINCINNATI · PI CUSHION, MELANIE T · 2008 to 2011
$1.5M
NIAID NIH HHS 5R01AI076104-04NIAID NIH HHS R01 AI076104NIEHS NIH HHS P30 ES006096NIEHS NIH HHS P30-ES006096
6 · The paper itself

Abstract

Pneumocystis pneumonia (PCP) remains a leading opportunistic infection in patients with weakened immune systems. The fungus causing the infection belongs to the genus, Pneumocystis, and its members are found in a large variety of mammals. Adaptation to the lung environment of a host with an intact immune system has been a key to its successful survival. Unfortunately, the metabolic strategies used by these fungi to grow and survive in this context are largely unknown. There were considerable impediments to standard approaches for investigation of this unique pathogen, the most problematic being the lack of a long term in vitro culture system. The absence of an ex vivo cultivation method remains today, and many fundamental scientific questions about the basic biology, metabolism, and life cycle of Pneumocystis are unanswered. Recent progress in sequencing of the Pneumocystis carinii genome, a species infecting rats, permitted a more informative search for genes and biological pathways within this pathogen that are known to be targets for existing antifungal agents. In this work, we review the classes of antifungal drugs with respect to their potential applicability to the treatment of PCP. Classes covered in the review are the azoles, polyenes, allylamines, and echinocandins. Factors limiting the use of standard antifungal treatments and the currently available alternatives (trimethoprim-sulfamethoxazole, atovaquone, and pentamidine) are discussed. A summary of genomic sequences within Pneumocystis carinii associated with the corresponding targeted biological pathways is provided. All sequences are available via the Pneumocystis Genome Project at http://pgp.cchmc.org/.

Indexed as

Drug DesignAnimalsAntifungal AgentsDrug Resistance, FungalGene Expression Regulation, FungalGenome, FungalHumansMolecular StructurePneumocystis cariniiPneumocystis InfectionsStructure-Activity RelationshipTreatment OutcomeAntifungal Agents

Identifiers

PMID22934582
PMCPMC3907186
OpenAlexW2145327455

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.