Evidence map›Paper›PMID 22933599›Full record

ArticleJournal of clinical microbiology2012

Evaluation of methods for identification and determination of the taxonomic status of strains belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus complex isolated from animal, human, and dairy sources.

Patricia Lynn Shewmaker, Arnold G Steigerwalt, Anne M Whitney, Roger E Morey, James C Graziano, Richard R Facklam, Kimberlee A Musser, Vânia L C Merquior, Lucia M Teixeira

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Le infezioni in medicina · 2023
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  3. Case report: Multidrug-resistantFrontiers in veterinary science · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. First report of infective endocarditis caused byNew microbes and new infections · 2020
    Article
  9. Article
  10. A Case of Maternal Sepsis and Fetal Demise Associated withCase reports in obstetrics and gynecology · 2019
    Article
  11. A case of leg cellulitis caused by multidrug-resistantIntractable & rare diseases research · 2018
    Article
  12. Article
  13. The Brief Case: Too Beta To Be a "B".Journal of clinical microbiology · 2017
    Article
  14. Observational
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Patricia Lynn ShewmakerCenters for Disease Control and Prevention, Atlanta, Georgia, USA. paw3@cdc.gov
Arnold G Steigerwalt
Anne M Whitney
Roger E Morey
James C Graziano
Richard R Facklam
Kimberlee A Musser
Vânia L C Merquior
Lucia M Teixeira
Centers for Disease Control and Prevention · USNew York State Department of Health · USUniversidade do Estado do Rio de Janeiro · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ninety-seven animal, human, and dairy Streptococcus porcinus or Streptococcus pseudoporcinus isolates in the CDC Streptococcus strain collection were evaluated on the basis of DNA-DNA reassociation, 16S rRNA and rpoB gene sequencing, conventional biochemical and Rapid ID 32 Strep identification methods, and antimicrobial susceptibility testing to determine their taxonomic status, characteristics for species differentiation, antimicrobial susceptibility, and relevance of clinical source. Nineteen of the 97 isolates (1 human, 18 swine) were identified as S. porcinus. The remaining 72 human isolates and 6 dairy isolates were identified as S. pseudoporcinus. The use of 16S rRNA or rpoB gene sequencing was required to differentiate S. porcinus from S. pseudoporcinus. The human and dairy S. pseudoporcinus isolates were biochemically distinct from each other as well as distinct by 16S rRNA and rpoB gene sequencing. Therefore, we propose the subspecies denominations S. pseudoporcinus subsp. hominis subsp. nov. for the human isolates and S. pseudoporcinus subsp. lactis subsp. nov. for the dairy isolates. Most strains were susceptible to the antimicrobials tested, with the exception of tetracycline. Two strains of each species were also resistant to clindamycin and erythromycin and carried the erm(A) (S. pseudoporcinus) or the erm(B) (S. porcinus) gene. S. porcinus was identified from a single human isolate recovered from a wound in an abattoir worker. S. pseudoporcinus was primarily isolated from the genitourinary tract of women but was also associated with blood, placental, and wound infections. Isolates reacting with group B antiserum and demonstrating wide beta-hemolysis should be suspected of being S. pseudoporcinus and not S. agalactiae.

Indexed as

AnimalsAnti-Bacterial AgentsBacterial Typing TechniquesCluster AnalysisDairy ProductsDNA, BacterialDNA-Directed RNA PolymerasesDNA, RibosomalDrug Resistance, BacterialHumansMicrobial Sensitivity TestsMolecular Sequence DataNucleic Acid HybridizationPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNAAnti-Bacterial AgentsDNA, BacterialDNA-Directed RNA PolymerasesDNA, RibosomalRNA polymerase beta subunitRNA, Ribosomal, 16S

Identifiers

PMID22933599
PMCPMC3486230
OpenAlexW2020794809

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.