Evidence map›Paper›PMID 22931126›Full record

ArticleMolecular microbiology2012

Interspecies modulation of bacterial development through iron competition and siderophore piracy.

Matthew F Traxler, Mohammad R Seyedsayamdost, Jon Clardy, Roberto Kolter

Abstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed.

  1. Article
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  5. A quorum-sensing molecule fromProceedings of the National Academy of Sciences of the United States of America · 2026
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  8. Why Do FilamentousAnnual review of microbiology · 2025
    Review
  9. Article
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  12. Chemical Conversations.Molecules (Basel, Switzerland) · 2025
    Review
  13. Article
  14. International journal of systematic and evolutionary microbiology · 2024
    Article
  15. MOB rules: Antibiotic Exposure Reprograms Metabolism to MobilizebioRxiv : the preprint server for biology · 2024
    Article
  16. Article
  17. Article
  18. Interactions of DifferentInternational journal of molecular sciences · 2023
    Article
  19. Article
  20. Iron acquisition strategies in pseudomonads: mechanisms, ecology, and evolution.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2023
    Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Matthew F TraxlerDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA.
Mohammad R Seyedsayamdost
Jon Clardy
Roberto Kolter

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI KASPER, DENNIS L. · 2003 to 2013
$113.7M
Molecule-to-gene approaches to new natural productsR01GM086258 · NIGMS · HARVARD MEDICAL SCHOOL · PI CLARDY, JON · 2008 to 2016
$3.6M
Chemical Biology of Mircobial Interspecies SignalingR01GM082137 · NIGMS · HARVARD MEDICAL SCHOOL · PI KOLTER, ROBERTO G. · 2007 to 2015
$3.5M
Genome mining of newly sequenced streptomycetes for novel natural productsF32GM089044 · NIGMS · HARVARD MEDICAL SCHOOL · PI TRAXLER, MATTHEW F · 2009 to 2011
$144k
Molecular Analysis of Metabolites and Signaling Networks in Microbial SymbiosesK99GM098299 · NIGMS · HARVARD MEDICAL SCHOOL · PI SEYEDSAYAMDOST, MOHAMMAD R · 2011 to 2012
$135k
NIAID NIH HHS AI057159NIAID NIH HHS U54 AI057159NIGMS NIH HHS 1K99 GM098299-01NIGMS NIH HHS 5F32GM089044-02NIGMS NIH HHS F32 GM089044NIGMS NIH HHS GM086258NIGMS NIH HHS GM82137NIGMS NIH HHS K99 GM098299NIGMS NIH HHS R01 GM082137NIGMS NIH HHS R01 GM086258
6 · The paper itself

Abstract

While soil-dwelling actinomycetes are renowned for secreting natural products, little is known about the roles of these molecules in mediating actinomycete interactions. In a previous co-culture screen, we found that one actinomycete, Amycolatopsis sp. AA4, inhibited aerial hyphae formation in adjacent colonies of Streptomyces coelicolor. A siderophore, amychelin, mediated this developmental arrest. Here we present genetic evidence that confirms the role of the amc locus in the production of amychelin and in the inhibition of S. coelicolor development. We further characterize the Amycolatopsis sp. AA4 - S. coelicolor interaction by examining expression of developmental and iron acquisition genes over time in co-culture. Manipulation of iron availability and/or growth near Amycolatopsis sp. AA4 led to alterations in expression of the critical developmental gene bldN, and other key downstream genes in the S. coelicolor transcriptional cascade. In Amycolatopsis sp. AA4, siderophore genes were downregulated when grown near S. coelicolor, leading us to find that deferrioxamine E, produced by S. coelicolor, could be readily utilized by Amycolatopsis sp. AA4. Collectively these results suggest that competition for iron via siderophore piracy and species-specific siderophores can alter patterns of gene expression and morphological differentiation during actinomycete interactions.

Indexed as

ActinomycetalesBacterial ProteinsGene Expression Regulation, BacterialIronSiderophoresStreptomyces coelicolorBacterial ProteinsIronSiderophores

Identifiers

PMID22931126
PMCPMC3481010

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.