Evidence map›Paper›PMID 22931052›Full record

ArticleJournal of translational medicine2012

Prevalence of KRAS, BRAF, and PIK3CA somatic mutations in patients with colorectal carcinoma may vary in the same population: clues from Sardinia.

Grazia Palomba, Maria Colombino, Antonio Contu, Bruno Massidda, Giovanni Baldino, Antonio Pazzola, MariaTeresa Ionta, Francesca Capelli, Vittorio Trova, Tito Sedda and 16 more

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 40 citations in OpenAlex.

  1. Pooled it
  2. Biological factors driving colorectal cancer metastasis.World journal of gastrointestinal oncology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Molecular spectrum ofJournal of gastrointestinal oncology · 2016
    Article
  8. Article
  9. Prognostic role ofOncology letters · 2016
    Article
  10. Observational
  11. Article
  12. Article
  13. Article
  14. Article
  15. Oncology letters · 2014
    Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 1 country.

Grazia PalombaIstituto di Chimica Biomolecolare, CNR, Sassari, Italy.
Maria Colombino
Antonio Contu
Bruno Massidda
Giovanni Baldino
Antonio Pazzola
MariaTeresa Ionta
Francesca Capelli
Vittorio Trova
Tito Sedda
Giovanni Sanna
Francesco Tanda
Mario Budroni
Sardinian Translational Oncology Group (STOG)
Giuseppe Palmieri
Antonio Cossu
Marta Contu
Angelo Cuccu
Antonio Farris
Antonio Macciò
Giuseppe Mameli
Nina Olmeo
Salvatore Ortu
Elisabetta Petretto
Valeria Pusceddu
Luciano Virdis
Azienda Ospedaliero Universitaria di Sassari · ITIstituto di Chimica Biomolecolare · ITUniversity of Cagliari · ITAssociazione Istituzione Libera Università Nuorese · ITAssociazione Italiana Di Oncologia Medica · ITFondazione Centro Marino Internazionale · ITNational Research Council · ITUniversity of Sassari · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRole of KRAS, BRAF and PIK3CA mutations in pathogenesis of colorectal cancer (CRC) has been recently investigated worldwide. In this population-based study, we evaluated the incidence rates and distribution of such somatic mutations in genetically isolated population from Sardinia.

methodsFrom April 2009 to July 2011, formalin-fixed paraffin-embedded tissues (N = 478) were prospectively collected from Sardinian CRC patients at clinics across the entire island. Genomic DNA was isolated from tissue sections and screened for mutations in KRAS, BRAF, and PIK3CA genes by automated DNA sequencing.

resultsOverall, KRAS tumour mutation rate was 30% (145/478 positive cases). Distribution of mutation carriers was surprisingly different within the island: 87/204 (43%) in North Sardinia vs. 58/274 (21%) in Middle-South Sardinia (p<0.001). Among 384 CRC cases whose DNA was available, only one (0.3%) patient carried a mutation in BRAF gene; PIK3CA was found mutated in 67 (17%) patients. A significant inverse distribution of PIK3CA mutation rates was observed within Sardinian population: 19/183 (10%) cases from northern vs. 48/201 (24%) cases from central-southern island (p<0.001). This heterogeneity in frequencies of KRAS/PIK3CA somatic mutations is consistent with already-reported discrepancies in distribution of germline mutations for other malignancies within Sardinian population. Preliminary clinical evaluation of 118 KRAS wild-type patients undergoing anti-EGFR-based treatment indicated lack of role for PIK3CA in predicting response to therapy.

conclusionsOur findings support the hypothesis that differences in patients' origins and related genetic backgrounds may contribute to even determine the incidence rate of somatic mutations in candidate cancer genes.

Indexed as

Genes, rasGenetics, PopulationMutationBase SequenceClass I Phosphatidylinositol 3-KinasesColorectal NeoplasmsDNA PrimersFemaleHumansItalyMalePhosphatidylinositol 3-KinasesPolymerase Chain ReactionProto-Oncogene Proteins B-rafBRAF protein, humanClass I Phosphatidylinositol 3-KinasesDNA PrimersPhosphatidylinositol 3-KinasesPIK3CA protein, humanProto-Oncogene Proteins B-raf

Identifiers

PMID22931052
PMCPMC3480926
OpenAlexW2112534818

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.