ArticleHeredity2012
Genome scanning for detecting adaptive genes along environmental gradients in the Japanese conifer, Cryptomeria japonica.
Article in Heredity, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed.
- Chromosomal evolution and speciation inferred from chromosome-scale genome assemblies in three Cupressaceae species.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026Article
- Chromosome-Level Genome Assembly ofPlants (Basel, Switzerland) · 2026Article
- The Historical Biogeography of Divergence in the Relict CypressEcology and evolution · 2025Article
- Host-Associated Genetic Differentiation in the Face of Ongoing Gene Flow: Ecological Speciation in a Pathogenic Parasite of Freshwater Fish.Molecular biology and evolution · 2025Article
- Climate-Associated Genetic Variation and Projected Genetic Offsets forEvolutionary applications · 2025Article
- Transcriptome differentiation in Cryptomeria japonica trees with different origins growing in the north and south of Japan.PloS one · 2025Article
- Essential Oil Composition and Anti-Cholinesterase Properties ofPlants (Basel, Switzerland) · 2024Article
- Epigenetic architecture ofEcology and evolution · 2023Article
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- Population structure of wild soybean (PeerJ · 2023Article
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- Using two retrotransposon-based marker systems (SRAP and REMAP) for genetic diversity analysis of Moroccan Argan tree.Molecular biology research communications · 2020Article
- Genetic structure of Australian glass shrimp,PeerJ · 2020Article
- Inferring the demographic history of Japanese cedar, Cryptomeria japonica, using amplicon sequencing.Heredity · 2019Article
- Article
- Genome-wide SNP analyses reveal high gene flow and signatures of local adaptation among the scalloped spiny lobster (Panulirus homarus) along the Omani coastline.BMC genomics · 2018Article
- Local adaptation to temperature and precipitation in naturally fragmented populations of Cephalotaxus oliveri, an endangered conifer endemic to China.Scientific reports · 2016Article
- Evolutionary Quantitative Genomics of Populus trichocarpa.PloS one · 2015Article
- Population Structure, Genetic Variation, and Linkage Disequilibrium in Perennial Ryegrass Populations Divergently Selected for Freezing Tolerance.Frontiers in plant science · 2015Article
- Evidence for cryptic northern refugia in the last glacial period in Cryptomeria japonica.Annals of botany · 2014Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Local adaptation is important in evolutionary processes and speciation. We used multiple tests to identify several candidate genes that may be involved in local adaptation from 1026 loci in 14 natural populations of Cryptomeria japonica, the most economically important forestry tree in Japan. We also studied the relationships between genotypes and environmental variables to obtain information on the selective pressures acting on individual populations. Outlier loci were mapped onto a linkage map, and the positions of loci associated with specific environmental variables are considered. The outlier loci were not randomly distributed on the linkage map; linkage group 11 was identified as a genomic island of divergence. Three loci in this region were also associated with environmental variables such as mean annual temperature, daily maximum temperature, maximum snow depth, and so on. Outlier loci identified with high significance levels will be essential for conservation purposes and for future work on molecular breeding.
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