Evidence map›Paper›PMID 22928038›Full record

ArticlePloS one2012

miR290-5p/292-5p activate the immunoglobulin kappa locus in B cell development.

Patty B Garcia, Amie Cai, Jamie G Bates, Hector Nolla, Mark S Schlissel

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Patty B GarciaDepartment of Molecular and Cell Biology, University of California, Berkeley, California, United States of America.
Amie Cai
Jamie G Bates
Hector Nolla
Mark S Schlissel
University of California, Berkeley · USStanford University · US

Funding

TUMOR BIOLOGYT32CA009151 · NCI · STANFORD UNIVERSITY · PI CLEARY, MICHAEL L · 1985 to 2014
$5.5M
The Regulation of B Lymphocyte DevelopmentR01HL048702 · NHLBI · UNIVERSITY OF CALIFORNIA BERKELEY · PI SCHLISSEL, MARK S. · 1994 to 2011
$4.1M
NCI NIH HHS T32 CA009151NHLBI NIH HHS R01 HL048702NHLBI NIH HHS R01 HL48702
6 · The paper itself

Abstract

Regulated expression of miRNAs influences development in a wide variety of contexts. We report here that miR290-5p (100049710) and miR292-5p (100049711) are induced at the pre-B stage of murine B cell development and that they influence assembly of the Igκ light chain gene (243469) by contributing to the activation of germline Igκ transcription (κGT). We found that upon forced over-expression of miR290-5p/292-5p in Abelson Murine Leukemia Virus (AMuLV) transformed pro-B cells, two known activators of κGT, E2A (21423) and NF-κB (19697), show increased chromosomal binding to the kappa intronic enhancer. Conversely, knockdown of miR290-5p/292-5p in AMuLV pro-B cells blunts drug-induced activation of κGT. Furthermore, miR290-5p/292-5p knockdown also diminishes κGT activation, but not Rag1/2 (19373, 19374) expression, in an IL-7 dependent primary pro-B cell culture system. In addition, we identified a deficiency in κGT induction in miR290 cluster knockout mice. We hypothesize that increased expression of miR290-5p and miR292-5p contributes to the induction of κGT at the pre-B stage of B cell development through increased binding of NF-κB and E2A to kappa locus regulatory sequences.

Indexed as

Abelson murine leukemia virusAnimalsBasic Helix-Loop-Helix ProteinsBenzamidesB-LymphocytesCell DifferentiationCell Transformation, ViralDNAGene Expression RegulationGene Knockdown TechniquesGenetic LociImatinib MesylateImmunoglobulin kappa-ChainsIntronsMiceMicroRNAsBasic Helix-Loop-Helix ProteinsBenzamidesDNAImatinib MesylateImmunoglobulin kappa-ChainsMicroRNAsMIRN290 microRNA, mouseMIRN292 microRNA, mouseNF-kappa BPiperazinesPyrimidinesRNA, MessengerTcf3 protein, mouse

Identifiers

PMID22928038
PMCPMC3426528
OpenAlexW2025425446

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.