ArticlePloS one2012
Stratification of Archaea in the deep sediments of a freshwater meromictic lake: vertical shift from methanogenic to uncultured archaeal lineages.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.
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Who cites it
30 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea).The ISME journal · 2019Pooled it
- Seasons and vertical dynamics influence community composition in a flooded and abandoned mica mine.FEMS microbiology ecology · 2026Article
- A ubiquitous and diverse methanogenic community drives microbial methane cycling in eutrophic coastal sediments.FEMS microbiology ecology · 2025Article
- Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin.Microbiome · 2023Article
- Seasonal Dynamics of Abundance, Structure, and Diversity of Methanogens and Methanotrophs in Lake Sediments.Microbial ecology · 2021Article
- Eight Metagenome-Assembled Genomes Provide Evidence for Microbial Adaptation in 20,000- to 1,000,000-Year-Old Siberian Permafrost.Applied and environmental microbiology · 2021Article
- Article
- Article
- Anthropogenic and Environmental Constraints on the Microbial Methane Cycle in Coastal Sediments.Frontiers in microbiology · 2021Review
- Trace Metal Contamination Impacts Predicted Functions More Than Structure of Marine Prokaryotic Biofilm Communities in an Anthropized Coastal Area.Frontiers in microbiology · 2021Article
- Metabolic versatility of freshwater sedimentary archaea feeding on different organic carbon sources.PloS one · 2020Article
- Shifts in methanogenic archaea communities and methane dynamics along a subtropical estuarine land use gradient.PloS one · 2020Article
- Microbial Community Drivers in Anaerobic Granulation at High Salinity.Frontiers in microbiology · 2020Article
- Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem.Microorganisms · 2019Article
- Vertical stratification of bacteria and archaea in sediments of a small boreal humic lake.FEMS microbiology letters · 2019Article
- Surviving in hot and cold: psychrophiles and thermophiles from Deception Island volcano, Antarctica.Extremophiles : life under extreme conditions · 2018Article
- EPS Glycoconjugate Profiles Shift as Adaptive Response in Anaerobic Microbial Granulation at High Salinity.Frontiers in microbiology · 2018Article
- Abundance and Co-Distribution of Widespread Marine Archaeal Lineages in Surface Sediments of Freshwater Water Bodies across the Iberian Peninsula.Microbial ecology · 2017Article
- Shifts among Eukaryota, Bacteria, and Archaea define the vertical organization of a lake sediment.Microbiome · 2017Article
- Diversity, abundance and activity of ammonia-oxidizing microorganisms in fine particulate matter.Scientific reports · 2016Article
Corrections and comments
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
As for lineages of known methanogens, several lineages of uncultured archaea were recurrently retrieved in freshwater sediments. However, knowledge is missing about how these lineages might be affected and structured according to depth. In the present study, the vertical changes of archaeal communities were characterized in the deep sediment of the freshwater meromictic Lake Pavin. For that purpose, an integrated molecular approach was performed to gain information on the structure, composition, abundance and vertical stratification of archaeal communities thriving in anoxic freshwater sediments along a gradient of sediments encompassing 130 years of sedimentation. Huge changes occurred in the structure and composition of archaeal assemblages along the sediment core. Methanogenic taxa (i.e. Methanosaeta and Methanomicrobiales) were progressively replaced by uncultured archaeal lineages (i.e. Marine Benthic Group-D (MBG-D) and Miscellaneous Crenarchaeal Group (MCG)) which are suspected to be involved in the methane cycle.
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