Evidence map›Paper›PMID 22927413›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Heritable yeast prions have a highly organized three-dimensional architecture with interfiber structures.

Helen R Saibil, Anja Seybert, Anja Habermann, Juliane Winkler, Mikhail Eltsov, Mario Perkovic, Daniel Castaño-Diez, Margot P Scheffer, Uta Haselmann, Petr Chlanda and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. 'Intelligent' proteins.Cellular and molecular life sciences : CMLS · 2025
    Review
  3. Review
  4. Review
  5. Investigating eukaryotic cells with cryo-ET.Molecular biology of the cell · 2020
    Article
  6. Cryo-EM of amyloid fibrils and cellular aggregates.Current opinion in structural biology · 2019
    Review
  7. A new era for understanding amyloid structures and disease.Nature reviews. Molecular cell biology · 2018
    Review
  8. Review
  9. Translational Control by Prion-like Proteins.Trends in cell biology · 2018
    Review
  10. Molecular and structural architecture of polyQ aggregates in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  11. The Insoluble Protein Deposit (IPOD) in Yeast.Frontiers in molecular neuroscience · 2018
    Article
  12. Article
  13. Article
  14. Article
  15. Electron tomography reveals the fibril structure and lipid interactions in amyloid deposits.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Helen R SaibilCrystallography and Institute for Structural and Molecular Biology, Birkbeck College, London WC1E 7HX, United Kingdom. h.saibil@mail.cryst.bbk.ac.uk
Anja Seybert
Anja Habermann
Juliane Winkler
Mikhail Eltsov
Mario Perkovic
Daniel Castaño-Diez
Margot P Scheffer
Uta Haselmann
Petr Chlanda
Susan Lindquist
Jens Tyedmers
Achilleas S Frangakis

Funding

Membrane Remodeling in Viral Infection, Parasite Replication, and Traumatic Brain InjuryZIAHD001409 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI ZIMMERBERG, JOSHUA · 2009 to 2025
$29.9M
Howard Hughes Medical InstituteWellcome Trust
6 · The paper itself

Abstract

Yeast prions constitute a "protein-only" mechanism of inheritance that is widely deployed by wild yeast to create diverse phenotypes. One of the best-characterized prions, [PSI(+)], is governed by a conformational change in the prion domain of Sup35, a translation-termination factor. When this domain switches from its normal soluble form to an insoluble amyloid, the ensuing change in protein synthesis creates new traits. Two factors make these traits heritable: (i) the amyloid conformation is self-templating; and (ii) the protein-remodeling factor heat-shock protein (Hsp)104 (acting together with Hsp70 chaperones) partitions the template to daughter cells with high fidelity. Prions formed by several other yeast proteins create their own phenotypes but share the same mechanistic basis of inheritance. Except for the amyloid fibril itself, the cellular architecture underlying these protein-based elements of inheritance is unknown. To study the 3D arrangement of prion assemblies in their cellular context, we examined yeast [PSI(+)] prions in the native, hydrated state in situ, taking advantage of recently developed methods for cryosectioning of vitrified cells. Cryo-electron tomography of the vitrified sections revealed the prion assemblies as aligned bundles of regularly spaced fibrils in the cytoplasm with no bounding structures. Although the fibers were widely spaced, other cellular complexes, such as ribosomes, were excluded from the fibril arrays. Subtomogram image averaging, made possible by the organized nature of the assemblies, uncovered the presence of an additional array of densities between the fibers. We suggest these structures constitute a self-organizing mechanism that coordinates fiber deposition and the regulation of prion inheritance.

Indexed as

Models, MolecularProtein ConformationCryoelectron MicroscopyImage Processing, Computer-AssistedInheritance PatternsMicroscopy, FluorescencePrionsYeastsPrions

Identifiers

PMID22927413
PMCPMC3443181

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.