Evidence map›Paper›PMID 22924957›Full record

ArticleMolecular microbiology2012

Hfq-dependent, co-ordinate control of cyclic diguanylate synthesis and catabolism in the plague pathogen Yersinia pestis.

Lauren E Bellows, Benjamin J Koestler, Sara M Karaba, Christopher M Waters, Wyndham W Lathem

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
  3. CsrA-Mediated Translational Activation of theJournal of bacteriology · 2023
    Article
  4. Review
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  6. Article
  7. Article
  8. Article
  9. Review
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  11. Article
  12. Article
  13. Article
  14. Article
  15. Bacterial adhesion at the single-cell level.Nature reviews. Microbiology · 2018
    Review
  16. Article
  17. Article
  18. Discovering RNA-Based Regulatory Systems forFrontiers in cellular and infection microbiology · 2018
    Review
  19. Article
  20. HmsC ControlsFrontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Lauren E BellowsDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA.
Benjamin J Koestler
Sara M Karaba
Christopher M Waters
Wyndham W Lathem
Northwestern University · USMichigan State University · US

Funding

Vaccines and Therapies Against BotulismU54AI057153 · NIAID · UNIVERSITY OF CHICAGO · PI CROSSON, SEAN · 2003 to 2013
$87.6M
From structure to systems: Understanding cyclic di-GMP control of transcriptionR01GM109259 · NIGMS · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2015 to 2019
$2.0M
Characterization of the Cyclic Di-GMP Signaling System of Vibrio choleraeK22AI080937 · NIAID · MICHIGAN STATE UNIVERSITY · PI WATERS, CHRISTOPHER M · 2009 to 2010
$275k
Global and temporal effects of virulence gene expression during pneumonic plagueK22AI073781 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LATHEM, WYNDHAM W. · 2009 to 2010
$270k
NIAID NIH HHS K22 AI073781NIAID NIH HHS K22AI-073781NIAID NIH HHS K22 AI-080937NIAID NIH HHS K22 AI080937NIAID NIH HHS U54 AI057153NIAID NIH HHS U54AI-057153NIGMS NIH HHS R01 GM109259
6 · The paper itself

Abstract

Yersinia pestis, the cause of the disease plague, forms biofilms to enhance flea-to-mammal transmission. Biofilm formation is dependent on exopolysaccharide synthesis and is controlled by the intracellular levels of the second messenger molecule cyclic diguanylate (c-di-GMP), but the mechanisms by which Y. pestis regulates c-di-GMP synthesis and turnover are not fully understood. Here we show that the small RNA chaperone Hfq contributes to the regulation of c-di-GMP levels and biofilm formation by modulating the abundance of both the c-di-GMP phosphodiesterase HmsP and the diguanylate cyclase HmsT. To do so, Hfq co-ordinately promotes hmsP mRNA accumulation while simultaneously decreasing the stability of the hmsT transcript. Hfq-dependent regulation of HmsP occurs at the transcriptional level while the regulation of HmsT is post-transcriptional and is localized to the 5' untranslated region/proximal coding sequence of the hmsT transcript. Decoupling HmsP from Hfq-based regulation is sufficient to overcome the effects of Δhfq on c-di-GMP and biofilm formation. We propose that Y. pestis utilizes Hfq to link c-di-GMP levels to environmental conditions and that the disregulation of c-di-GMP turnover in the absence of Hfq may contribute to the severe attenuation of Y. pestis lacking this RNA chaperone in animal models of plague.

Indexed as

Gene Expression Regulation, Bacterial3',5'-Cyclic-GMP PhosphodiesterasesBacterial ProteinsBase SequenceCyclic GMPEscherichia coli ProteinsHost Factor 1 ProteinHumansMolecular Sequence DataPhosphorus-Oxygen LyasesPlagueYersinia pestis3',5'-Cyclic-GMP PhosphodiesterasesBacterial Proteinsbis(3',5')-cyclic diguanylic acidCyclic GMPdiguanylate cyclaseEscherichia coli ProteinsHost Factor 1 ProteinPhosphorus-Oxygen Lyases

Identifiers

PMID22924957
PMCPMC3480973
OpenAlexW1489315571

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.