Evidence map›Paper›PMID 22924408›Full record

ReviewFEMS microbiology letters2012

Novel traits of Trichoderma predicted through the analysis of its secretome.

Irina S Druzhinina, Ekaterina Shelest, Christian P Kubicek

Abstract readReview
In one paragraph

Review in FEMS microbiology letters, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

  1. Article
  2. NativeFrontiers in microbiology · 2026
    Article
  3. Article
  4. Article
  5. Frontiers in microbiology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Proteomics of Two Thermotolerant Isolates ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  10. Article
  11. An Update onMicroorganisms · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Hydrophobin HFBII-4 from Trichoderma asperellum induces antifungal resistance in poplar.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019
    Article
  17. Frontiers in microbiology · 2019
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Irina S DruzhininaResearch Division Biotechnology and Microbiology, Institute of Chemical Engineering, Vienna University of Technology, Vienna, Austria.
Ekaterina Shelest
Christian P Kubicek

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycotrophic species of Trichoderma are among the most common fungi isolated from free soil, dead wood and as parasites on sporocarps of other fungi (mycoparasites). In addition, they undergo various other biotrophic associations ranging from rhizosphere colonization and endophytism up to facultative pathogenesis on such animals as roundworms and humans. Together with occurrence on a variety of less common substrata (marine invertebrates, artificial materials, indoor habitats), these lifestyles illustrate a wealthy opportunistic potential of the fungus. One tropical species, Trichoderma reesei, has become a prominent producer of cellulases and hemicellulases, whereas several other species are applied in agriculture for the biological control of phytopathogenic fungi. The sequencing of the complete genomes of the three species (T. reesei, T. virens, and T. atroviride) has led to a deepened understanding of Trichoderma lifestyle and its molecular physiology. In this review, we present the in silico predicted secretome of Trichoderma, and - in addition to the unique features of carbohydrate active enzymes - demonstrate the importance of such protein families as proteases, oxidative enzymes, and small cysteine-rich proteins, all of that received little attention in Trichoderma genetics so far. We also discuss the link between Trichoderma secretome and biology of the fungus.

Indexed as

Genome, FungalCarbohydrate MetabolismComputational BiologyFungal ProteinsProteomeTrichodermaFungal ProteinsProteome

Identifiers

PMID22924408
PMCPMC3533174

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.