Evidence map›Paper›PMID 22922875›Full record

SynthesisNature genetics2012

Genome-wide association analyses identify three new susceptibility loci for primary angle closure glaucoma.

Eranga N Vithana, Chiea-Chuen Khor, Chunyan Qiao, Monisha E Nongpiur, Ronnie George, Li-Jia Chen, Tan Do, Khaled Abu-Amero, Chor Kai Huang, Sancy Low and 69 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 11 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 11 pooled it
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 11 syntheses or guidelines pooled it, 233 citations in OpenAlex.

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  18. FOXP4 Variants Are Associated With Plateau Iris and Angle Closure Glaucoma.Investigative ophthalmology & visual science · 2025
    Article
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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

79 authors at 20 institutions in 9 countries.

Eranga N Vithana *Singapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Chiea-Chuen Khor *Singapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Chunyan Qiao *Beijing Ophthalmology & Visual Sciences Key Laboratory, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Monisha E NongpiurSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Ronnie GeorgeVision Research Foundation, Sankara Nethralaya, Chennai, India.
Li-Jia ChenDepartment of Ophthalmology & Visual Sciences, Chinese University of Hong Kong, Hong Kong, China.
Tan DoVietnam National Institute of Ophthalmology, Hanoi, Vietnam.
Khaled Abu-AmeroDepartment of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia.
Chor Kai HuangShantou University-Chinese University of Hong Kong Joint Shantou International Eye Center, Shantou, China.
Sancy LowNational Institute for Health Research (NIHR) Biomedical Research Centre for Ophthalmology at Moorfields Eye Hospital and University College London (UCL) Institute of Ophthalmology, London, UK.
Liza-Sharmini A TajudinDepartment of Ophthalmology, School of Medical Sciences, Universiti Sains Malaysia, Kota Bharu, Malaysia.
Shamira A PereraSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Ching-Yu ChengSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Liang XuBeijing Institute of Ophthalmology, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Hongyan JiaBeijing Ophthalmology & Visual Sciences Key Laboratory, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Ching-Lin HoSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Kar Seng SimHuman Genetics, Genome Institute of Singapore, Singapore.
Ren-Yi WuSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Clement C Y ThamDepartment of Ophthalmology & Visual Sciences, Chinese University of Hong Kong, Hong Kong, China.
Paul T K ChewDepartment of Ophthalmology, National University Health System & National University of Singapore, Singapore.
Daniel H SuSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Francis T OenSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Sripriya SarangapaniVision Research Foundation, Sankara Nethralaya, Chennai, India.
Nagaswamy SoumittraVision Research Foundation, Sankara Nethralaya, Chennai, India.
Essam A OsmanDepartment of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia.
Hon-Tym WongDepartment of Ophthalmology, Tan Tock Seng Hospital, Singapore.
Guangxian TangXingtai Eye Hospital, Xingtai, China.
Sujie FanHandan Eye Hospital, Handan, China.
Hailin MengAnyang Eye Hospital, Anyang, China.
Dao T L HuongVietnam National Institute of Ophthalmology, Hanoi, Vietnam.
Hua WangBeijing Ophthalmology & Visual Sciences Key Laboratory, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Bo FengBeijing Ophthalmology & Visual Sciences Key Laboratory, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Mani BaskaranSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Balekudaru ShanthaVision Research Foundation, Sankara Nethralaya, Chennai, India.
Vedam L RamprasadVision Research Foundation, Sankara Nethralaya, Chennai, India.
Govindasamy KumaramanickavelVision Research Foundation, Sankara Nethralaya, Chennai, India.
Sudha K IyengarDepartment of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio, USA.
Alicia C HowSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Kelvin Y LeeSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Theru A SivakumaranDepartment of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio, USA.
Victor H K YongSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Serena M L TingSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Yang LiDepartment of Ophthalmology, School of Medical Sciences, Universiti Sains Malaysia, Kota Bharu, Malaysia.
Ya-Xing WangBeijing Institute of Ophthalmology, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Wan-Ting TaySingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Xueling SimCentre for Molecular Epidemiology, National University of Singapore, Singapore.
Raghavan LavanyaSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Belinda K CornesSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Ying-Feng ZhengSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Tina T WongSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Seng-Chee LoonDepartment of Ophthalmology, National University Health System & National University of Singapore, Singapore.
Vernon K Y YongDepartment of Ophthalmology, Tan Tock Seng Hospital, Singapore.
Naushin WaseemNational Institute for Health Research (NIHR) Biomedical Research Centre for Ophthalmology at Moorfields Eye Hospital and University College London (UCL) Institute of Ophthalmology, London, UK.
Azhany YaakubDepartment of Ophthalmology, School of Medical Sciences, Universiti Sains Malaysia, Kota Bharu, Malaysia.
Kee-Seng ChiaSaw Swee Hock School of Public Health, National University of Singapore, Singapore.
R Rand AllinghamDepartment of Opthamology, Duke University Medical Center, Durham, North Carolina, USA.
Michael A HauserDepartment of Opthamology, Duke University Medical Center, Durham, North Carolina, USA.
Dennis S C LamDepartment of Ophthalmology & Visual Sciences, Chinese University of Hong Kong, Hong Kong, China.
Martin L HibberdInfectious Diseases, Genome Institute of Singapore, Singapore.
Shomi S BhattacharyaNational Institute for Health Research (NIHR) Biomedical Research Centre for Ophthalmology at Moorfields Eye Hospital and University College London (UCL) Institute of Ophthalmology, London, UK.
Mingzhi ZhangShantou University-Chinese University of Hong Kong Joint Shantou International Eye Center, Shantou, China.
Yik Ying TeoHuman Genetics, Genome Institute of Singapore, Singapore.
Donald T TanSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Jost B JonasDepartment of Ophthalmology, Medical Faculty Mannheim of the Ruprecht-Karls-University Heidelberg, Heidelberg, Germany.
E-Shyong TaiSaw Swee Hock School of Public Health, National University of Singapore, Singapore.
Seang-Mei SawSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Do Nhu HonVietnam National Institute of Ophthalmology, Hanoi, Vietnam.
Saleh A Al-ObeidanDepartment of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia.
Jianjun LiuHuman Genetics, Genome Institute of Singapore, Singapore.
Tran Nguyen Bich ChauOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Cameron P SimmonsOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Jin-Xin BeiState Key Laboratory of Oncology in Southern China, Guangzhou, China.
Yi-Xin ZengState Key Laboratory of Oncology in Southern China, Guangzhou, China.
Paul J FosterNational Institute for Health Research (NIHR) Biomedical Research Centre for Ophthalmology at Moorfields Eye Hospital and University College London (UCL) Institute of Ophthalmology, London, UK.
Lingam VijayaVision Research Foundation, Sankara Nethralaya, Chennai, India.
Tien-Yin WongSingapore Eye Research Institute, Singapore National Eye Centre, Singapore.
Chi-Pui PangDepartment of Ophthalmology & Visual Sciences, Chinese University of Hong Kong, Hong Kong, China.
Ningli Wang *Beijing Ophthalmology & Visual Sciences Key Laboratory, Beijing Tongren Eye Center, Beijing Tongren Hospital, Capital Medical University, Beijing, China.
Tin Aung *Singapore Eye Research Institute, Singapore National Eye Centre, Singapore.
National University of Singapore · SGSingapore Eye Research Institute · SGSingapore National Eye Center · SGSankara Nethralaya · INChinese University of Hong Kong · CNBeijing Tongren Hospital · CNCapital Medical University · CNGenome Institute of Singapore · SGHospital Universiti Sains Malaysia · MYCase Western Reserve University · USDuke Medical Center · USKing Saud University · SANational Hospital of Pediatrics · VNNational Institute for Health Research · GBNational University Health System · SGOxford University Clinical Research Unit · VNTan Tock Seng Hospital · SGAnyang Eye Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNHan Dan City Eye Hospital - The Third Hospital of Handan · CN

Funding

Wellcome Trust 084368
6 · The paper itself

Abstract

Primary angle closure glaucoma (PACG) is a major cause of blindness worldwide. We conducted a genome-wide association study including 1,854 PACG cases and 9,608 controls across 5 sample collections in Asia. Replication experiments were conducted in 1,917 PACG cases and 8,943 controls collected from a further 6 sample collections. We report significant associations at three new loci: rs11024102 in PLEKHA7 (per-allele odds ratio (OR)=1.22; P=5.33×10(-12)), rs3753841 in COL11A1 (per-allele OR=1.20; P=9.22×10(-10)) and rs1015213 located between PCMTD1 and ST18 on chromosome 8q (per-allele OR=1.50; P=3.29×10(-9)). Our findings, accumulated across these independent worldwide collections, suggest possible mechanisms explaining the pathogenesis of PACG.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyCarrier ProteinsCase-Control StudiesCollagen Type XIGenetic LociGlaucoma, Angle-ClosureHumansLogistic ModelsPolymorphism, Single NucleotidePrincipal Component AnalysisProtein D-Aspartate-L-Isoaspartate MethyltransferaseRepressor ProteinsCarrier ProteinsCOL11A1 protein, humanCollagen Type XIPLEKHA7 protein, humanProtein D-Aspartate-L-Isoaspartate MethyltransferaseRepressor ProteinsST18 protein, human

Identifiers

PMID22922875
PMCPMC4333205
OpenAlexW2091531773

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.