Evidence map›Paper›PMID 22922161›Full record

ReviewCurrent opinion in genetics & development2012

Epigenetic obstacles encountered by transcription factors: reprogramming against all odds.

Casey A Gifford, Alexander Meissner

Abstract readReview
In one paragraph

Review in Current opinion in genetics & development, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Intrinsic mechanisms of neuronal axon regeneration.Nature reviews. Neuroscience · 2018
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Germline and Pluripotent Stem Cells.Cold Spring Harbor perspectives in biology · 2015
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Casey A GiffordDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA 02138, USA.
Alexander Meissner

Funding

Regulatory Roles and Dynamics of Nuclear long-noncoding RNAs in PluripotencyP01GM099117 · NIGMS · HARVARD UNIVERSITY · PI MEISSNER, ALEXANDER · 2011 to 2021
$21.2M
Production sequencing of reference human epigenomesU01ES017155 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BERNSTEIN, BRADLEY EVAN, MEISSNER, ALEXANDER · 2008 to 2012
$15.4M
NIEHS NIH HHS U01 ES017155NIEHS NIH HHS U01ES017155NIGMS NIH HHS P01 GM099117NIGMS NIH HHS P01GM099117
6 · The paper itself

Abstract

Reprogramming of a somatic nucleus to an induced pluripotent state can be achieved in vitro through ectopic expression of Oct4 (Pou5f1), Sox2, Klf4 and c-Myc. While the ability of these factors to regulate transcription in a pluripotent context has been studied extensively, their ability to interact with and remodel a somatic genome remains underexplored. Several recent studies have begun to provide mechanistic insights that will eventually lead to a more rational design and improved understanding of nuclear reprogramming.

Indexed as

Cellular ReprogrammingEpigenesis, GeneticAnimalsCell DifferentiationDNA-Binding ProteinsGene Expression RegulationHumansKruppel-Like Factor 4Kruppel-Like Transcription FactorsOctamer Transcription Factor-3SOXB1 Transcription FactorsTranscription FactorsDNA-Binding ProteinsKLF4 protein, humanKruppel-Like Factor 4Kruppel-Like Transcription FactorsMYCBP protein, humanOctamer Transcription Factor-3SOXB1 Transcription FactorsTranscription Factors

Identifiers

PMID22922161
PMCPMC3490009

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.