Evidence map›Paper›PMID 22920393›Full record

ArticlePharmacogenomics2012

Targeted pharmacogenetic analysis of antipsychotic response in the CATIE study.

Qian Liu, Maidar Jamba, Calvin Patrick, Saranya Padmanabhan, Mark D Brennan

Abstract read
In one paragraph

Article in Pharmacogenomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Trial
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Qian LiuSureGene, LLC, 600 Envoy Circle, Louisville, KY 40299, USA.
Maidar Jamba
Calvin Patrick
Saranya Padmanabhan
Mark D Brennan

Funding

Genomic Biomarkers for Neuropsychiatric IllnessesR44MH078437 · NIMH · SUREGENE, LLC · PI BRENNAN, MARK DAVID · 2009 to 2011
$1.1M
Replication of Schizophrenia Associations in CATIER01MH074027 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SULLIVAN, PATRICK F · 2006 to 2007
$715k
Genetic Test for Schizophrenia Susceptibility: TargetedR43MH078437 · NIMH · SUREGENE, LLC · PI BRENNAN, MARK DAVID · 2006 to 2007
$497k
Pop-Track NIMHZ01MH900001 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI POP-TRACK, IC · 2002 to 2003
–
NIMH NIH HHS MH074027NIMH NIH HHS MH078437NIMH NIH HHS N01 MH900001NIMH NIH HHS R01 MH074027NIMH NIH HHS R43 MH078437NIMH NIH HHS R44 MH078437
6 · The paper itself

Abstract

aimThis study evaluated the impact of 6789 SNPs on treatment response to antipsychotics in Caucasian patients from the CATIE study. MATERIALS &

methodsAn Illumina (CA, USA) BeadChip was designed that targeted genes potentially impacting disease risk, disease presentation or antipsychotic response. SNPs tagged regions of linkage disequilibrium or functional variants not detectable using previous genotypes for CATIE. Change in Positive and Negative Syndrome scale total score was modeled using a mixed model repeated measures method that assumed a 30-day lag period. Genetic association analysis was performed using linear regression.

resultsAssociation analysis identified 20 SNPs with p-values of ≤5 × 10(-4). Many of these are in genes previously implicated in schizophrenia and other neuropsychiatric diseases.

conclusionThe targeted approach identified SNPs possibly influencing response to antipsychotic drugs in Caucasian patients suffering from schizophrenia. The findings support a biological link between disease risk and presentation and antipsychotic response.

Indexed as

Genetic Association StudiesAdultAntipsychotic AgentsBiomarkers, PharmacologicalClinical Trials as TopicFemaleHumansLinkage DisequilibriumMalePharmacogeneticsPolymorphism, Single NucleotideSchizophreniaUnited StatesWhite PeopleAntipsychotic AgentsBiomarkers, Pharmacological

Identifiers

PMID22920393
PMCPMC3518380

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.