Evidence map›Paper›PMID 22919074›Full record

ArticleGenome research2012

Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans.

Huriya Beyan, Thomas A Down, Sreeram V Ramagopalan, Kristina Uvebrant, Anita Nilsson, Michelle L Holland, Carolina Gemma, Gavin Giovannoni, Bernhard O Boehm, George C Ebers and 4 more

Abstract read
In one paragraph

Article in Genome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

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  16. The Role of Epigenetics in Type 1 Diabetes.Current diabetes reports · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Huriya BeyanThe Blizard Institute, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London E1 2AT, United Kingdom.
Thomas A Down
Sreeram V Ramagopalan
Kristina Uvebrant
Anita Nilsson
Michelle L Holland
Carolina Gemma
Gavin Giovannoni
Bernhard O Boehm
George C Ebers
Åke Lernmark
Corrado M Cilio
R David Leslie
Vardhman K Rakyan

Funding

Biotechnology and Biological Sciences Research Council BB/H012494/1Medical Research Council G0801975Medical Research Council G0801976Wellcome Trust 092096
6 · The paper itself

Abstract

A major concern in common disease epigenomics is distinguishing causal from consequential epigenetic variation. One means of addressing this issue is to identify the temporal origins of epigenetic variants via longitudinal analyses. However, prospective birth-cohort studies are expensive and time consuming. Here, we report DNA methylomics of archived Guthrie cards for the retrospective longitudinal analyses of in-utero-derived DNA methylation variation. We first validate two methodologies for generating comprehensive DNA methylomes from Guthrie cards. Then, using an integrated epigenomic/genomic analysis of Guthrie cards and follow-up samplings, we identify interindividual DNA methylation variation that is present both at birth and 3 yr later. These findings suggest that disease-relevant epigenetic variation could be detected at birth, i.e., before overt clinical disease. Guthrie card methylomics offers a potentially powerful and cost-effective strategy for studying the dynamics of interindividual epigenomic variation in a range of common human diseases.

Indexed as

AllelesDNA MethylationEpigenesis, GeneticFemaleGenetic LociGenetic VariationGenome, HumanHematologic TestsHigh-Throughput Nucleotide SequencingHumansInfant, NewbornLongitudinal StudiesMaleSequence Analysis, DNA

Identifiers

PMID22919074
PMCPMC3483543

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.