Evidence map›Paper›PMID 22918178›Full record

SynthesisOncotarget2012

Meta-analysis of clinical data using human meiotic genes identifies a novel cohort of highly restricted cancer-specific marker genes.

Julia Feichtinger, Ibrahim Aldeailej, Rebecca Anderson, Mikhlid Almutairi, Ahmed Almatrafi, Naif Alsiwiehri, Keith Griffiths, Nicholas Stuart, Jane A Wakeman, Lee Larcombe and 1 more

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in Oncotarget, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 2 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 2 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Article
  6. Article
  7. IncreasedPharmaceuticals (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Article
  10. Higher Expression Levels ofMedicina (Kaunas, Lithuania) · 2023
    Article
  11. Article
  12. Tools used to assay genomic instability in cancers and cancer meiomitosis.Journal of cell communication and signaling · 2022
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Multifaceted Role of PRDM Proteins in Human Cancer.International journal of molecular sciences · 2020
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Julia FeichtingerNorth West Cancer Research Fund Institute, Bangor University, Bangor, LL57 2UW, UK.
Ibrahim Aldeailej
Rebecca Anderson
Mikhlid Almutairi
Ahmed Almatrafi
Naif Alsiwiehri
Keith Griffiths
Nicholas Stuart
Jane A Wakeman
Lee Larcombe
Ramsay J McFarlane
Bangor University · GBBetsi Cadwaladr University Health Board · GBCranfield University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identifying cancer-specific biomarkers represents an ongoing challenge to the development of novel cancer diagnostic, prognostic and therapeutic strategies. Cancer/testis (CT) genes are an important gene family with expression tightly restricted to the testis in normal individuals but which can also be activated in cancers. Here we develop a pipeline to identify new CT genes. We analysed and validated expression profiles of human meiotic genes in normal and cancerous tissue followed by meta-analyses of clinical data sets from a range of tumour types resulting in the identification of a large cohort of highly specific cancer biomarker genes, including the recombination hot spot activator PRDM9 and the meiotic cohesin genes SMC1beta and RAD21L. These genes not only provide excellent cancer biomarkers for diagnostics and prognostics, but may serve as oncogenes and have excellent drug targeting potential.

Indexed as

Genes, NeoplasmAntigens, NeoplasmBiomarkers, TumorCell Cycle ProteinsCell Line, TumorChromosomal Proteins, Non-HistoneGene Expression ProfilingGene Expression Regulation, NeoplasticHistone-Lysine N-MethyltransferaseHumansMaleMeiosisOligonucleotide Array Sequence AnalysisStructural Maintenance of Chromosome Protein 1TestisAntigens, NeoplasmBiomarkers, TumorCell Cycle ProteinsChromosomal Proteins, Non-HistoneHistone-Lysine N-MethyltransferasePRDM9 protein, humanREC8 protein, humanStructural Maintenance of Chromosome Protein 1

Identifiers

PMID22918178
PMCPMC3478461
OpenAlexW2152026286

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.