Evidence map›Paper›PMID 22916218›Full record

ArticlePloS one2012

The Methylococcus capsulatus (Bath) secreted protein, MopE*, binds both reduced and oxidized copper.

Thomas Ve, Karina Mathisen, Ronny Helland, Odd A Karlsen, Anne Fjellbirkeland, Åsmund K Røhr, K Kristoffer Andersson, Rolf-Birger Pedersen, Johan R Lillehaug, Harald B Jensen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Complete genome sequences ofMicrobiology resource announcements · 2024
    Article
  2. Review
  3. Article
  4. Copper binding by a unique family of metalloproteins is dependent on kynurenine formation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Chalkophores.Annual review of biochemistry · 2018
    Review
  10. Metals and Methanotrophy.Applied and environmental microbiology · 2018
    Review
  11. Article
  12. Methanobactins: from genome to function.Metallomics : integrated biometal science · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Thomas VeDepartment of Molecular Biology, University of Bergen, Bergen, Norway.
Karina Mathisen
Ronny Helland
Odd A Karlsen
Anne Fjellbirkeland
Åsmund K Røhr
K Kristoffer Andersson
Rolf-Birger Pedersen
Johan R Lillehaug
Harald B Jensen
University of Bergen · NOUniversity of Oslo · NONorwegian University of Science and Technology · NOUiT The Arctic University of Norway · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under copper limiting growth conditions the methanotrophic bacterium Methylococcus capsulatus (Bath) secrets essentially only one protein, MopE*, to the medium. MopE* is a copper-binding protein whose structure has been determined by X-ray crystallography. The structure of MopE* revealed a unique high affinity copper binding site consisting of two histidine imidazoles and one kynurenine, the latter an oxidation product of Trp130. In this study, we demonstrate that the copper ion coordinated by this strong binding site is in the Cu(I) state when MopE* is isolated from the growth medium of M. capsulatus. The conclusion is based on X-ray Near Edge Absorption spectroscopy (XANES), and Electron Paramagnetic Resonance (EPR) studies. EPR analyses demonstrated that MopE*, in addition to the strong copper-binding site, also binds Cu(II) at two weaker binding sites. Both Cu(II) binding sites have properties typical of non-blue type II Cu (II) centres, and the strongest of the two Cu(II) sites is characterised by a relative high hyperfine coupling of copper (A(||) =20 mT). Immobilized metal affinity chromatography binding studies suggests that residues in the N-terminal part of MopE* are involved in forming binding site(s) for Cu(II) ions. Our results support the hypothesis that MopE plays an important role in copper uptake, possibly making use of both its high (Cu(I) and low Cu(II) affinity properties.

Indexed as

Bacterial ProteinsBinding SitesCarrier ProteinsChromatography, AffinityCopperElectron Spin Resonance SpectroscopyMethylococcus capsulatusOxidation-ReductionBacterial ProteinsCarrier ProteinsCoppercopper-binding protein

Identifiers

PMID22916218
PMCPMC3423442
OpenAlexW2079895050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.