Evidence map›Paper›PMID 22916034›Full record

ArticlePLoS genetics2012

Identification of human proteins that modify misfolding and proteotoxicity of pathogenic ataxin-1.

Spyros Petrakis, Tamás Raskó, Jenny Russ, Ralf P Friedrich, Martin Stroedicke, Sean-Patrick Riechers, Katja Muehlenberg, Angeli Möller, Anita Reinhardt, Arunachalam Vinayagam and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
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  10. Chemical Biology Framework to Illuminate Proteostasis.Annual review of biochemistry · 2020
    Review
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  18. Prion-like proteins sequester and suppress the toxicity of huntingtin exon 1.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Spyros PetrakisNeuroproteomics, Max Delbrueck Center for Molecular Medicine, Berlin, Germany.
Tamás Raskó
Jenny Russ
Ralf P Friedrich
Martin Stroedicke
Sean-Patrick Riechers
Katja Muehlenberg
Angeli Möller
Anita Reinhardt
Arunachalam Vinayagam
Martin H Schaefer
Michael Boutros
Hervé Tricoire
Miguel A Andrade-Navarro
Erich E Wanker
Max Delbrück Center · DEHeidelberg University · DEUnit of Functional and Adaptive Biology · FRUniversité Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins with long, pathogenic polyglutamine (polyQ) sequences have an enhanced propensity to spontaneously misfold and self-assemble into insoluble protein aggregates. Here, we have identified 21 human proteins that influence polyQ-induced ataxin-1 misfolding and proteotoxicity in cell model systems. By analyzing the protein sequences of these modifiers, we discovered a recurrent presence of coiled-coil (CC) domains in ataxin-1 toxicity enhancers, while such domains were not present in suppressors. This suggests that CC domains contribute to the aggregation- and toxicity-promoting effects of modifiers in mammalian cells. We found that the ataxin-1-interacting protein MED15, computationally predicted to possess an N-terminal CC domain, enhances spontaneous ataxin-1 aggregation in cell-based assays, while no such effect was observed with the truncated protein MED15ΔCC, lacking such a domain. Studies with recombinant proteins confirmed these results and demonstrated that the N-terminal CC domain of MED15 (MED15CC) per se is sufficient to promote spontaneous ataxin-1 aggregation in vitro. Moreover, we observed that a hybrid Pum1 protein harboring the MED15CC domain promotes ataxin-1 aggregation in cell model systems. In strong contrast, wild-type Pum1 lacking a CC domain did not stimulate ataxin-1 polymerization. These results suggest that proteins with CC domains are potent enhancers of polyQ-mediated protein misfolding and aggregation in vitro and in vivo.

Indexed as

AnimalsAtaxin-1AtaxinsChlorocebus aethiopsCOS CellsEscherichia coliHumansMediator ComplexMutationNerve Tissue ProteinsNuclear ProteinsPeptidesPlasmidsPolymerizationProtein FoldingProtein Structure, SecondaryAtaxin-1AtaxinsATXN1 protein, humanMED15 protein, humanMediator ComplexNerve Tissue ProteinsNuclear ProteinsPeptidespolyglutaminePUM1 protein, humanRecombinant Fusion ProteinsRNA-Binding Proteins

Identifiers

PMID22916034
PMCPMC3420947
OpenAlexW2001002027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.