Evidence map›Paper›PMID 22916009›Full record

Trial reportPLoS pathogens2012

CD160 and PD-1 co-expression on HIV-specific CD8 T cells defines a subset with advanced dysfunction.

Yoav Peretz, Zhong He, Yu Shi, Bader Yassine-Diab, Jean-Philippe Goulet, Rebeka Bordi, Ali Filali-Mouhim, Jean-Baptiste Loubert, Mohamed El-Far, Franck P Dupuy and 7 more

Open access · goldAbstract readClinical Trial
In one paragraph

Trial report in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 1 pooled it
6.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 1 synthesis or guideline pooled it, 142 citations in OpenAlex.

  1. Pooled it
  2. Peripheral PD-1Frontiers in immunology · 2019
    Trial
  3. Trial
  4. Trial
  5. Trial
  6. Review
  7. Increased CD95Frontiers in immunology · 2026
    Article
  8. Review
  9. Article
  10. Article
  11. IL-27 effects on HIVFrontiers in virology (Lausanne, Switzerland) · 2025
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Yoav PeretzCaprion/ImmuneCarta Services, Montreal, Quebec, Canada.
Zhong He
Yu Shi
Bader Yassine-Diab
Jean-Philippe Goulet
Rebeka Bordi
Ali Filali-Mouhim
Jean-Baptiste Loubert
Mohamed El-Far
Franck P Dupuy
Mohamed Rachid Boulassel
Cécile Tremblay
Jean-Pierre Routy
Nicole Bernard
Robert Balderas
Elias K Haddad
Rafick-Pierre Sékaly
Vaccine & Gene Therapy Institute of Florida · USUniversité de Montréal · CARoyal Victoria Regional Health Centre · CABD Biosciences (United States) · USCaprion (Canada) · CAMcGill University · CA

Funding

Targeting the PD-1 signaling pathway to rescue HIV T cell dysfunctionP01AI080192 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI · 2008 to 2012
$12.6M
Specimen Acquisition and Distribution CoreP01AI076174 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI LEDERMAN, MICHAEL MARCEL · 2008 to 2012
$10.9M
CIHRNIAID NIH HHS P01 AI076174NIAID NIH HHS P01 AI080192NIAID NIH HHS P01AI080192
6 · The paper itself

Abstract

Chronic viral infections lead to persistent CD8 T cell activation and functional exhaustion. Expression of programmed cell death-1 (PD-1) has been associated to CD8 T cell dysfunction in HIV infection. Herein we report that another negative regulator of T cell activation, CD160, was also upregulated on HIV-specific CD8 T lymphocytes mostly during the chronic phase of infection. CD8 T cells that expressed CD160 or PD-1 were still functional whereas co-expression of CD160 and PD-1 on CD8 T cells defined a novel subset with all the characteristics of functionally exhausted T cells. Blocking the interaction of CD160 with HVEM, its natural ligand, increased HIV-specific CD8 T cell proliferation and cytokine production. Transcriptional profiling showed that CD160(-)PD-1(+)CD8 T cells encompassed a subset of CD8(+) T cells with activated transcriptional programs, while CD160(+)PD-1(+) T cells encompassed primarily CD8(+) T cells with an exhausted phenotype. The transcriptional profile of CD160(+)PD-1(+) T cells showed the downregulation of the NFκB transcriptional node and the upregulation of several inhibitors of T cell survival and function. Overall, we show that CD160 and PD-1 expressing subsets allow differentiating between activated and exhausted CD8 T cells further reinforcing the notion that restoration of function will require multipronged approaches that target several negative regulators.

Indexed as

Antigens, CDCD8-Positive T-LymphocytesCell DifferentiationCell ProliferationCell SurvivalCytokinesDown-RegulationFemaleGPI-Linked ProteinsHIV-1HIV InfectionsHumansMaleNF-kappa BProgrammed Cell Death 1 ReceptorReceptors, ImmunologicAntigens, CDCD160 protein, humanCytokinesGPI-Linked ProteinsNF-kappa BPDCD1 protein, humanProgrammed Cell Death 1 ReceptorReceptors, Immunologic

Identifiers

PMID22916009
PMCPMC3420930
OpenAlexW2048088501

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.