Evidence map›Paper›PMID 22915738›Full record

ArticleJournal of experimental botany2012

Role of Vacuolar H+-inorganic pyrophosphatase in tomato fruit development.

Seedahmed A Mohammed, Sogo Nishio, Hideyuki Takahashi, Katsuhiro Shiratake, Hiroki Ikeda, Koki Kanahama, Yoshinori Kanayama

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Characterization of the FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 HomologInternational journal of molecular sciences · 2021
    Article
  3. Salinity Tolerance of Two Potato Cultivars (Frontiers in plant science · 2018
    Article
  4. Frontiers in plant science · 2017
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Seedahmed A MohammedGraduate School of Life Sciences, Tohoku University Sendai 980-8577 Japan.
Sogo Nishio
Hideyuki Takahashi
Katsuhiro Shiratake
Hiroki Ikeda
Koki Kanahama
Yoshinori Kanayama
Tohoku University · JPZero to Three · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

cDNA corresponding to two type-I vacuolar H(+)-inorganic pyrophosphatases (V-PPases) (SlVP1, SlVP2) and one type-II V-PPase (SlVP3) was isolated from tomato fruit to investigate their role in fruit development. Southern analysis revealed that type-I V-PPase genes form a multigene family, whereas there is only one type-II V-PPase gene in the tomato genome. Although SlVP1 and SlVP2 were differentially expressed in leaves and mature fruit, the highest levels of both SlVP1 and SlVP2 mRNA were observed in fruit at 2-4 days after anthesis. The expression pattern of type-II SlVP3 was similar to that of SlVP2, and the highest levels of SlVP3 mRNA were also observed in fruit at 2-4 days after anthesis, thus suggesting that SlVP3 plays a role in early fruit development. Because SlVP1 and SlVP2 mRNA was more abundant than SlVP3 mRNA, expression of type-I V-PPases was analysed further. Type-I V-PPase mRNA was localized in ovules and their vicinities and in vascular tissue at an early stage of fruit development. Tomato RNAi lines in which the expression of type-I V-PPase genes was repressed using the fruit-specific promoter TPRP-F1 exhibited fruit growth retardation at an early stage of development. Although the major function of V-PPases in fruit has been believed to be the accumulation of materials such as sugars and organic acids in the vacuole during cell expansion and ripening, these results show that specific localization of V-PPase mRNA induced by pollination has a novel role in the cell division stage.

Indexed as

Amino Acid SequenceCell DivisionDNA, ComplementaryFruitGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicGene Expression Regulation, PlantInorganic PyrophosphataseMolecular Sequence DataOrgan SpecificityPhenotypePhylogenyPollinationRNA InterferenceRNA, MessengerRNA, PlantDNA, ComplementaryInorganic PyrophosphataseRNA, MessengerRNA, Plant

Identifiers

PMID22915738
PMCPMC3444275
OpenAlexW2056738101

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.