Evidence map›Paper›PMID 22915650›Full record

ArticleBlood2012

IgH partner breakpoint sequences provide evidence that AID initiates t(11;14) and t(8;14) chromosomal breaks in mantle cell and Burkitt lymphomas.

Harvey A Greisman, Zhengfei Lu, Albert G Tsai, Timothy C Greiner, Hye Son Yi, Michael R Lieber

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 63 citations in OpenAlex.

  1. Insights on SNPs of Human Activation-Induced Cytidine Deaminase AID.International journal of molecular sciences · 2025
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. The mechanisms of human lymphoid chromosomal translocations and their medical relevance.Critical reviews in biochemistry and molecular biology · 2022
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Genome instability and lymphoma.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2021
    Article
  15. Article
  16. Review
  17. Article
  18. Activation-induced cytidine deaminase: in sickness and in health.Journal of cancer research and clinical oncology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Harvey A GreismanDepartment of Laboratory Medicine, University of Washington, Seattle, WA 98195, USA. greisman@uw.edu
Zhengfei Lu
Albert G Tsai
Timothy C Greiner
Hye Son Yi
Michael R Lieber
University of Southern California · USUniversity of Washington · USBipar · FRUniversity of Nebraska at Omaha · US

Funding

Mechanism of R-loop Formation in CSR and SHMR01GM056984 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LIEBER, MICHAEL R · 1998 to 2015
$2.7M
NIGMS NIH HHS R01 GM056984
6 · The paper itself

Abstract

Previous studies have implicated activation-induced cytidine deaminase (AID) in B-cell translocations but have failed to identify any association between their chromosomal breakpoints and known AID target sequences. Analysis of 56 unclustered IgH-CCND1 translocations in mantle cell lymphoma across the ~ 344-kb bcl-1 breakpoint locus demonstrates that half of the CCND1 breaks are near CpG dinucleotides. Most of these CpG breaks are at CGC motifs, and half of the remaining breaks are near WGCW, both known AID targets. These findings provide the strongest evidence to date that AID initiates chromosomal breaks in translocations that occur in human bone marrow B-cell progenitors. We also identify WGCW breaks at the MYC locus in Burkitt lymphoma translocations and murine IgH-MYC translocations, both of which arise in mature germinal center B cells. Finally, we propose a developmental model to explain the transition from CpG breaks in early human B-cell progenitors to WGCW breaks in later stage B cells.

Indexed as

Chromosome BreakageAICDA (Activation-Induced Cytidine Deaminase)AnimalsBurkitt LymphomaChromosomes, Human, Pair 11Chromosomes, Human, Pair 14Chromosomes, Human, Pair 8Comparative Genomic HybridizationCpG IslandsCyclin D1Cytidine DeaminaseGenes, mycHumansImmunoglobulin Heavy ChainsLymphoma, Mantle-CellMiceAICDA (Activation-Induced Cytidine Deaminase)CCND1 protein, humanCyclin D1Cytidine DeaminaseIGH-CCND1 fusion protein, humanImmunoglobulin Heavy ChainsOncogene Proteins, Fusion

Identifiers

PMID22915650
PMCPMC3466967
OpenAlexW2038247445

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.