Evidence map›Paper›PMID 22915590›Full record

ArticleThe Journal of biological chemistry2012

Dephosphorylation of HuR protein during alphavirus infection is associated with HuR relocalization to the cytoplasm.

Alexa M Dickson, John R Anderson, Michael D Barnhart, Kevin J Sokoloski, Lauren Oko, Mateusz Opyrchal, Evanthia Galanis, Carol J Wilusz, Thomas E Morrison, Jeffrey Wilusz

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 61 citations in OpenAlex.

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  11. RNA regulatory processes in RNA virus biology.Wiley interdisciplinary reviews. RNA · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Alexa M DicksonDepartment of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, Colorado 80523, USA.
John R Anderson
Michael D Barnhart
Kevin J Sokoloski
Lauren Oko
Mateusz Opyrchal
Evanthia Galanis
Carol J Wilusz
Thomas E Morrison
Jeffrey Wilusz
Colorado State University · USMayo Clinic · USUniversity of Colorado Denver · USIndiana University Bloomington · US

Funding

Vascular stabilization as a broad theraprutic platform for biodefenseU54AI065357 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI OLSON, KENNETH E · 2005 to 2013
$77.5M
Virus-Mosquito mRNA StabilityR01AI063434 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI WILUSZ, JEFFREY · 2005 to 2009
$1.7M
NIAID NIH HHS AI063434NIAID NIH HHS R01 AI063434NIAID NIH HHS U54 AI-065357NIAID NIH HHS U54 AI065357
6 · The paper itself

Abstract

We have demonstrated previously that the cellular HuR protein binds U-rich elements in the 3' untranslated region (UTR) of Sindbis virus RNA and relocalizes from the nucleus to the cytoplasm upon Sindbis virus infection in 293T cells. In this study, we show that two alphaviruses, Ross River virus and Chikungunya virus, lack the conserved high-affinity U-rich HuR binding element in their 3' UTRs but still maintain the ability to interact with HuR with nanomolar affinities through alternative binding elements. The relocalization of HuR protein occurs during Sindbis infection of multiple mammalian cell types as well as during infections with three other alphaviruses. Interestingly, the relocalization of HuR is not a general cellular reaction to viral infection, as HuR protein remained largely nuclear during infections with dengue and measles virus. Relocalization of HuR in a Sindbis infection required viral gene expression, was independent of the presence of a high-affinity U-rich HuR binding site in the 3' UTR of the virus, and was associated with an alteration in the phosphorylation state of HuR. Sindbis virus-induced HuR relocalization was mechanistically distinct from the movement of HuR observed during a cellular stress response, as there was no accumulation of caspase-mediated HuR cleavage products. Collectively, these data indicate that virus-induced HuR relocalization to the cytoplasm is specific to alphavirus infections and is associated with distinct posttranslational modifications of this RNA-binding protein.

Indexed as

Protein Processing, Post-Translational3' Untranslated RegionsAlphavirusAlphavirus InfectionsAnimalsCaspasesChlorocebus aethiopsCytoplasmELAV ProteinsGene Expression Regulation, ViralHEK293 CellsHumansPhosphorylationProtein TransportProteolysisRNA, Viral3' Untranslated RegionsCaspasesELAV ProteinsRNA, Viral

Identifiers

PMID22915590
PMCPMC3476290
OpenAlexW2120666343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.