Evidence map›Paper›PMID 22912844›Full record

ArticlePloS one2012

Discovery of a natural product-like c-myc G-quadruplex DNA groove-binder by molecular docking.

Dik-Lung Ma, Daniel Shiu-Hin Chan, Wai-Chung Fu, Hong-Zhang He, Hui Yang, Siu-Cheong Yan, Chung-Hang Leung

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Small molecules targeting c-Myc oncogene: promising anti-cancer therapeutics.International journal of biological sciences · 2014
    Review
  13. Hit identification of IKKβ natural product inhibitor.BMC pharmacology & toxicology · 2013
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Dik-Lung MaDepartment of Chemistry, Hong Kong Baptist University, Kowloon Tong, Hong Kong, China.
Daniel Shiu-Hin Chan
Wai-Chung Fu
Hong-Zhang He
Hui Yang
Siu-Cheong Yan
Chung-Hang Leung
Hong Kong Baptist University · HKHong Kong Polytechnic University · HKUniversity of Macau · MO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The natural product-like carbamide (1) has been identified as a stabilizer of the c-myc G-quadruplex through high-throughput virtual screening. NMR and molecular modeling experiments revealed a groove-binding mode for 1. The biological activity of 1 against the c-myc G-quadruplex was confirmed by its ability to inhibit Taq polymerase-mediated DNA extension and c-myc expression in vitro, demonstrating that 1 is able to control c-myc gene expression at the transcriptional level presumably through the stabilization of the c-myc promoter G-quadruplex. Furthermore, the interaction between carbamide analogues and the c-myc G-quadruplex was also investigated by in vitro experiments in order to generate a brief structure-activity relationship (SAR) for the observed potency of carbamide 1.

Indexed as

Models, MolecularBiological ProductsDNA PrimersG-QuadruplexesHep G2 CellsHigh-Throughput Screening AssaysHumansMolecular StructureNuclear Magnetic Resonance, BiomolecularProto-Oncogene Proteins c-mycReverse Transcriptase Polymerase Chain ReactionRNA StabilityStructure-Activity RelationshipUreaBiological ProductsDNA PrimersProto-Oncogene Proteins c-mycUrea

Identifiers

PMID22912844
PMCPMC3422278
OpenAlexW1990393306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.