Evidence map›Paper›PMID 22912842›Full record

ArticlePloS one2012

Characterization of the host factors required for hepadnavirus covalently closed circular (ccc) DNA formation.

Haitao Guo, Chunxiao Xu, Tianlun Zhou, Timothy M Block, Ju-Tao Guo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Hepatitis B Virus Nucleocapsid Assembly.Journal of molecular biology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Haitao GuoDepartment of Microbiology and Immunology, Drexel University College of Medicine, Doylestown, Pennsylvania, United States of America. ju-tao.guo@drexelmed.edu
Chunxiao Xu
Tianlun Zhou
Timothy M Block
Ju-Tao Guo
Drexel University · USHepatitis B Foundation · US

Funding

Development of a novel drug candidate that inhibits hepatitis B virus covalentlyR01AI094474 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI GUO, HAITAO · 2011 to 2015
$3.4M
NIAID NIH HHS AI094474NIAID NIH HHS R01 AI094474
6 · The paper itself

Abstract

Synthesis of the covalently closed circular (ccc) DNA is a critical, but not well-understood step in the life cycle of hepadnaviruses. Our previous studies favor a model that removal of genome-linked viral DNA polymerase occurs in the cytoplasm and the resulting deproteinized relaxed circular DNA (DP-rcDNA) is subsequently transported into the nucleus and converted into cccDNA. In support of this model, our current study showed that deproteinization of viral double-stranded linear (dsl) DNA also took place in the cytoplasm. Furthermore, we demonstrated that Ku80, a component of non-homologous end joining DNA repair pathway, was essential for synthesis of cccDNA from dslDNA, but not rcDNA. In an attempt to identify additional host factors regulating cccDNA biosynthesis, we found that the DP-rcDNA was produced in all tested cell lines that supported DHBV DNA replication, but cccDNA was only synthesized in the cell lines that accumulated high levels of DP-rcDNA, except for NCI-H322M and MDBK cells, which failed to synthesize cccDNA despite of the existence of nuclear DP-rcDNA. The results thus imply that while removal of the genome-linked viral DNA polymerase is most likely catalyzed by viral or ubiquitous host function(s), nuclear factors required for the conversion of DP-rcDNA into cccDNA and/or its maintenance are deficient in the above two cell lines, which could be useful tools for identification of the elusive host factors essential for cccDNA biosynthesis or maintenance.

Indexed as

Active Transport, Cell NucleusAnimalsAntigens, NuclearBlotting, WesternCHO CellsCricetinaeCricetulusCytoplasmDNA-Binding ProteinsDNA, CircularDNA, ViralHepadnaviridaeHep G2 CellsHumansKu AutoantigenModels, BiologicalAntigens, NuclearDNA-Binding ProteinsDNA, CircularDNA, ViralKu AutoantigenXrcc6 protein, human

Identifiers

PMID22912842
PMCPMC3418247
OpenAlexW2043722115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.