Evidence map›Paper›PMID 22912795›Full record

ArticlePloS one2012

HIV-1 RNA may decline more slowly in semen than in blood following initiation of efavirenz-based antiretroviral therapy.

Susan M Graham, Sarah E Holte, Joan A Dragavon, Kelly M Ramko, Kishor N Mandaliya, R Scott McClelland, Norbert M Peshu, Eduard J Sanders, John N Krieger, Robert W Coombs

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Semen Bacterial Concentrations and HIV-1 RNA Shedding Among HIV-1-Seropositive Kenyan Men.Journal of acquired immune deficiency syndromes (1999) · 2017
    Article
  2. Semen as the Way Forward to Understand HIV-1 Transmission.The Journal of infectious diseases · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Susan M GrahamDepartment of Medicine, University of Washington, Seattle, Washington, United States of America. grahamsm@u.washington.edu
Sarah E Holte
Joan A Dragavon
Kelly M Ramko
Kishor N Mandaliya
R Scott McClelland
Norbert M Peshu
Eduard J Sanders
John N Krieger
Robert W Coombs

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Judith Tsui · 1988 to 2026
$104.9M
Mathematical and Experimental Models for HIV DynamicsR01AI055343 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HOLTE, SARAH E · 2003 to 2007
$1.7M
Genital HIV-1 Shedding among Women Starting Second-Line Antiretroviral TherapyK23AI069990 · NIAID · UNIVERSITY OF WASHINGTON · PI GRAHAM, SUSAN MARIE · 2006 to 2010
$633k
Initiating Studies of Genitourinary HIV-1 Shedding among Kenyan MenR21HD055864 · NICHD · UNIVERSITY OF WASHINGTON · PI COOMBS, ROBERT W. · 2007 to 2008
$424k
NIAID NIH HHS K23 AI-069990NIAID NIH HHS K23 AI069990NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI-055343NIAID NIH HHS R01 AI055343NICHD NIH HHS R21 HD-055864NICHD NIH HHS R21 HD055864Wellcome Trust 092654
6 · The paper itself

Abstract

objectivesAntiretroviral therapy (ART) decreases HIV-1 RNA levels in semen and reduces sexual transmission from HIV-1-infected men. Our objective was to study the time course and magnitude of seminal HIV-1 RNA decay after initiation of efavirenz-based ART among 13 antiretroviral-naïve Kenyan men.

methodsHIV-1 RNA was quantified (lower limit of detection, 120 copies/mL) in blood and semen at baseline and over the first month of ART. Median log(10) HIV-1 RNA was compared at each time-point using Wilcoxon Signed Rank tests. Perelson's two-phase viral decay model and nonlinear random effects were used to compare decay rates in blood and semen.

resultsMedian baseline HIV-1 RNA was 4.40 log(10) copies/mL in blood (range, 3.20-5.08 log(10) copies/mL) and 3.69 log(10) copies/mL in semen (range, <2.08-4.90 log(10) copies/mL). The median reduction in HIV-1 RNA by day 28 was 1.90 log(10) copies/mL in blood (range, 0.56-2.68 log(10) copies/mL) and 1.36 log(10) copies/mL in semen (range, 0-2.66 log(10) copies/mL). ART led to a decrease from baseline by day 7 in blood and day 14 in semen (p = 0.005 and p = 0.006, respectively). The initial modeled decay rate was slower in semen than in blood (p = 0.06). There was no difference in second-phase decay rates between blood and semen.

conclusionsEfavirenz-based ART reduced HIV-1 RNA levels more slowly in semen than in blood. Although this difference was of borderline significance in this small study, our observations suggest that there is suboptimal suppression of seminal HIV-1 RNA for some men in the early weeks of treatment.

Indexed as

AlkynesBenzoxazinesCyclopropanesGene Expression Regulation, ViralHIV-1HIV InfectionsHumansKenyaMaleModels, GeneticRNA, ViralSemenStatistics, NonparametricAlkynesBenzoxazinesCyclopropanesefavirenzRNA, Viral

Identifiers

PMID22912795
PMCPMC3418270

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.