Evidence map›Paper›PMID 22912677›Full record

ArticlePloS one2012

Proteomic investigation of falciparum and vivax malaria for identification of surrogate protein markers.

Sandipan Ray, Durairaj Renu, Rajneesh Srivastava, Kishore Gollapalli, Santosh Taur, Tulip Jhaveri, Snigdha Dhali, Srinivasarao Chennareddy, Ankit Potla, Jyoti Bajpai Dikshit and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Trial
  2. Article
  3. Multi-Omics Advancements towardsDiagnostics (Basel, Switzerland) · 2021
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  10. Frontiers in cellular and infection microbiology · 2018
    Review
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  15. Observational
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  20. Serum Apolipoprotein-A1 and Cholesterol Levels in Nigerian Children with Plasmodium falciparum Infection.Medical principles and practice : international journal of the Kuwait University, Health Science Centre · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Sandipan RayWadhwani Research Center for Biosciences and Bioengineering, Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai, India.
Durairaj Renu
Rajneesh Srivastava
Kishore Gollapalli
Santosh Taur
Tulip Jhaveri
Snigdha Dhali
Srinivasarao Chennareddy
Ankit Potla
Jyoti Bajpai Dikshit
Rapole Srikanth
Nithya Gogtay
Urmila Thatte
Swati Patankar
Sanjeeva Srivastava
Indian Institute of Technology Bombay · INKing Edward Memorial Hospital and Seth G.S. Medical College · INStrand Life Sciences (India) · INNational Centre for Cell Science · INWipro (India) · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study was conducted to analyze alterations in the human serum proteome as a consequence of infection by malaria parasites Plasmodium falciparum and P. vivax to obtain mechanistic insights about disease pathogenesis, host immune response, and identification of potential protein markers. Serum samples from patients diagnosed with falciparum malaria (FM) (n = 20), vivax malaria (VM) (n = 17) and healthy controls (HC) (n = 20) were investigated using multiple proteomic techniques and results were validated by employing immunoassay-based approaches. Specificity of the identified malaria related serum markers was evaluated by means of analysis of leptospirosis as a febrile control (FC). Compared to HC, 30 and 31 differentially expressed and statistically significant (p<0.05) serum proteins were identified in FM and VM respectively, and almost half (46.2%) of these proteins were commonly modulated due to both of the plasmodial infections. 13 proteins were found to be differentially expressed in FM compared to VM. Functional pathway analysis involving the identified proteins revealed the modulation of different vital physiological pathways, including acute phase response signaling, chemokine and cytokine signaling, complement cascades and blood coagulation in malaria. A panel of identified proteins consists of six candidates; serum amyloid A, hemopexin, apolipoprotein E, haptoglobin, retinol-binding protein and apolipoprotein A-I was used to build statistical sample class prediction models. By employing PLS-DA and other classification methods the clinical phenotypic classes (FM, VM, FC and HC) were predicted with over 95% prediction accuracy. Individual performance of three classifier proteins; haptoglobin, apolipoprotein A-I and retinol-binding protein in diagnosis of malaria was analyzed using receiver operating characteristic (ROC) curves. The discrimination of FM, VM, FC and HC groups on the basis of differentially expressed serum proteins demonstrates the potential of this analytical approach for the detection of malaria as well as other human diseases.

Indexed as

ProteomicsAdultBiomarkersBlood ProteinsHumansMalaria, FalciparumMalaria, VivaxMiddle AgedModels, StatisticalPhenotypeProtein Interaction MapsTranscriptomeYoung AdultBiomarkersBlood Proteins

Identifiers

PMID22912677
PMCPMC3415403
OpenAlexW2010997088

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.