Evidence map›Paper›PMID 22912644›Full record

ArticleFrontiers in plant science2012

Genetic analysis of morphological traits in a new, versatile, rapid-cycling Brassica rapa recombinant inbred line population.

Hedayat Bagheri, Mohamed El-Soda, Inge van Oorschot, Corrie Hanhart, Guusje Bonnema, Tanja Jansen-van den Bosch, Rolf Mank, Joost J B Keurentjes, Lin Meng, Jian Wu and 2 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Novel quantitative trait loci from an interspecificFrontiers in plant science · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Flowering Time Gene Variation inFrontiers in plant science · 2017
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Hedayat BagheriLaboratory of Genetics, Wageningen University Wageningen, Netherlands.
Mohamed El-Soda
Inge van Oorschot
Corrie Hanhart
Guusje Bonnema
Tanja Jansen-van den Bosch
Rolf Mank
Joost J B Keurentjes
Lin Meng
Jian Wu
Maarten Koornneef
Mark G M Aarts

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A recombinant inbred line (RIL) population was produced based on a wide cross between the rapid-cycling and self-compatible genotypes L58, a Caixin vegetable type, and R-o-18, a yellow sarson oil type. A linkage map based on 160 F7 lines was constructed using 100 Single nucleotide polymorphisms (SNPs), 130 AFLP®, 27 InDel, and 13 publicly available SSR markers. The map covers a total length of 1150 centiMorgan (cM) with an average resolution of 4.3 cM/marker. To demonstrate the versatility of this new population, 17 traits, related to plant architecture and seed characteristics, were subjected to quantitative trait loci (QTL) analysis. A total of 47 QTLs were detected, each explaining between 6 and 54% of the total phenotypic variance for the concerned trait. The genetic analysis shows that this population is a useful new tool for analyzing genetic variation for interesting traits in B. rapa, and for further exploitation of the recent availability of the B. rapa whole genome sequence for gene cloning and gene function analysis.

Indexed as

Brassica rapaplant breedingQTL analysisrecombinant inbred line population

Identifiers

PMID22912644
PMCPMC3419917

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.