Evidence map›Paper›PMID 22908033›Full record

ArticleG3 (Bethesda, Md.)2012

Expression profiling of attenuated mitochondrial function identifies retrograde signals in Drosophila.

William A Freije, Sudip Mandal, Utpal Banerjee

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. eLife · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Mitochondrial retrograde signaling regulates neuronal function.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
  10. Article
  11. Review
  12. Mitochondrial signaling: forwards, backwards, and in between.Oxidative medicine and cellular longevity · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

William A FreijeDepartment of Molecular, Cell, and Developmental Biology, University of California-Los Angeles, CA 90095, USA.
Sudip Mandal
Utpal Banerjee
University of California, Los Angeles · USBroad Center · US

Funding

Signaling and Metabolic Control in the Drosophila EyeR01EY008152 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BANERJEE, UTPAL · 1990 to 2015
$6.7M
NEI NIH HHS R01 EY008152NEI NIH HHS R01-EY-08152
6 · The paper itself

Abstract

Mitochondria are able to modulate cell state and fate during normal and pathophysiologic conditions through a nuclear-mediated mechanism collectively termed as a retrograde response. Our previous studies in Drosophila melanogaster have clearly established that progress through the cell cycle is precisely regulated by the intrinsic activity of the mitochondrion by specific signaling cascades mounted by the cell. As a means to further our understanding of how mitochondrial energy status affects nuclear control of basic cell decisions, we have employed Affymetrix microarray-based transcriptional profiling of Drosophila S2 cells knocked down for the gene encoding subunit Va of the complex IV of the mitochondrial electron transport chain. The profiling data identify transcriptional upregulation of glycolytic genes, and metabolic studies confirm this increase in glycolysis. The data provide a model of the shift of metabolism from a predominately oxidative state toward a predominately aerobic glycolytic state mediated through transcriptional control. The transcriptional changes alter many signaling systems, including p53, insulin, hypoxia-induced factor α, and conserved mitochondrial retrograde responses. This rich dataset provides many novel targets for further understanding the mechanism whereby the mitochondrion manages energy substrate disposition and directs cellular fate decisions.

Indexed as

Gene Expression RegulationSignal TransductionAnimalsCells, CulturedDrosophila melanogasterDrosophila ProteinsElectron Transport Complex IVEnergy MetabolismGene Expression ProfilingGlycolysisHypoxia-Inducible Factor 1, alpha SubunitInsulinMitochondriaProtein SubunitsRNA InterferenceTumor Suppressor Protein p53Drosophila ProteinsElectron Transport Complex IVHypoxia-Inducible Factor 1, alpha SubunitInsulinProtein SubunitsTumor Suppressor Protein p53cytochrome oxidase Vaelectron transportglycolysislactatemicroarray

Identifiers

PMID22908033
PMCPMC3411240
OpenAlexW2147808845

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.