Evidence map›Paper›PMID 22907887›Full record

ReviewHead & neck2013

Lessons learned from next-generation sequencing in head and neck cancer.

Myriam Loyo, Ryan J Li, Chetan Bettegowda, Curtis R Pickering, Mitchell J Frederick, Jeffrey N Myers, Nishant Agrawal

Abstract readReview
In one paragraph

Review in Head & neck, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 64 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Updates on Larynx Cancer: Risk Factors and Oncogenesis.International journal of molecular sciences · 2023
    Review
  6. ACS omega · 2023
    Article
  7. Review
  8. Recommendations for the use of biomarkers for head and neck cancer, including salivary gland tumours: a consensus of the Spanish Society of Medical Oncology and the Spanish Society of Pathology.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Tumor PD-L1 status and CD8Oncotarget · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Myriam LoyoDepartment of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Ryan J Li
Chetan Bettegowda
Curtis R Pickering
Mitchell J Frederick
Jeffrey N Myers
Nishant Agrawal
The University of Texas MD Anderson Cancer Center · USJohns Hopkins Medicine · USJohns Hopkins University · USZero to Three · US

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI Rosalie Wollett · 1985 to 2026
$208.6M
Genone-wide Discovery of Molecular Alterations in Head and Neck CancerRC2DE020957 · NIDCR · JOHNS HOPKINS UNIVERSITY · PI AGRAWAL, NISHANT, SIDRANSKY, DAVID · 2009 to 2010
$2.5M
Comprehensive Analysis of Genetic Alterations in Oral CancerRC2DE020958 · NIDCR · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI GIBBS, RICHARD A, MYERS, JEFFREY NICHOLAS · 2009 to 2010
$2.4M
NCI NIH HHS P30 CA006973NIDCR NIH HHS RC2 DE020957NIDCR NIH HHS RC2DE020957NIDCR NIH HHS RC2 DE020958NIDCR NIH HHS RC2DE020958
6 · The paper itself

Abstract

Scientific innovation has enabled whole exome capture and massively parallel sequencing of cancer genomes. In head and neck cancer, next-generation sequencing has granted us further understanding of the mutational spectrum of squamous cell carcinoma. As a result of these new technologies, frequently occurring mutations were identified in NOTCH1, a gene that had not previously been implicated in head and neck cancer. The current review describes the most common mutations in head and neck cancer: TP53, NOTCH1, HRAS, PIK3CA, and CDKN2A. Emphasis is placed on the involved cellular pathways, clinical correlations, and potential therapeutic interventions. Additionally, the implications of human papillomavirus on mutation patterns are discussed.

Indexed as

Carcinoma, Squamous CellClass I Phosphatidylinositol 3-KinasesCyclin-Dependent Kinase Inhibitor p16DNA Mutational AnalysisGenetic Predisposition to DiseaseHead and Neck NeoplasmsHumansMutationPhosphatidylinositol 3-KinasesProto-Oncogene Proteins p21(ras)Receptor, Notch1Squamous Cell Carcinoma of Head and NeckTumor Suppressor Protein p53Class I Phosphatidylinositol 3-KinasesCyclin-Dependent Kinase Inhibitor p16HRAS protein, humanNOTCH1 protein, humanPhosphatidylinositol 3-KinasesPIK3CA protein, humanProto-Oncogene Proteins p21(ras)Receptor, Notch1TP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID22907887
PMCPMC3715072
OpenAlexW2097521644

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.