Evidence map›Paper›PMID 22907758›Full record

ArticleMolecular and cellular biology2012

Poly(A) binding protein C1 is essential for efficient L1 retrotransposition and affects L1 RNP formation.

Lixin Dai, Martin S Taylor, Kathryn A O'Donnell, Jef D Boeke

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
  2. Article
  3. The molecular determinants of PABPC-mediated deadenylation rate.bioRxiv : the preprint server for biology · 2026
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  13. Affinity-Based Interactome Analysis of Endogenous LINE-1 Macromolecules.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Lixin DaiHigh Throughput Biology Center, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Martin S Taylor
Kathryn A O'Donnell
Jef D Boeke
Johns Hopkins University · US

Funding

TRANSPOSITION OF TN7P01CA016519 · NCI · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 1985 to 2010
$21.4M
TRANSPOSITION MECHANISMSR01GM036481 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BOEKE, JEF D · 1986 to 2011
$5.6M
NCI NIH HHS P01 CA016519NCI NIH HHS P01CA16519NIGMS NIH HHS R01 GM036481NIGMS NIH HHS R01-GM36481
6 · The paper itself

Abstract

Poly(A) binding proteins (PABPs) specifically bind the polyadenosine tail of mRNA and have been shown to be important for RNA polyadenylation, translation initiation, and mRNA stability. Using a modified L1 retrotransposition vector, we examined the effects of two PABPs (encoded by PABPN1 and PABPC1) on the retrotransposition activity of the L1 non-long-terminal-repeat (non-LTR) retrotransposon in both HeLa and HEK293T cells. We demonstrated that knockdown of these two genes by RNA interference (RNAi) effectively reduced L1 retrotransposition by 70 to 80% without significantly changing L1 transcription or translation or the status of the poly(A) tail. We identified that both poly(A) binding proteins were associated with the L1 ribonucleoprotein complex, presumably through L1 mRNA. Depletion of PABPC1 caused a defect in L1 RNP formation. Knockdown of the PABPC1 inhibitor PAIP2 increased L1 retrotransposition up to 2-fold. Low levels of exogenous overexpression of PABPN1 and PABPC1 increased L1 retrotransposition, whereas unregulated overexpression of these two proteins caused pleiotropic effects, such as hypersensitivity to puromycin and decreased L1 activity. Our data suggest that PABPC1 is essential for the formation of L1 RNA-protein complexes and may play a role in L1 RNP translocation in the host cell.

Indexed as

AdenosineCarrier ProteinsCell Line, TumorHEK293 CellsHeLa CellsHumansLong Interspersed Nucleotide ElementsPeptide Chain Initiation, TranslationalPoly(A)-Binding Protein IPolyadenylationPolymersProtein BiosynthesisProtein TransportPuromycinRepressor ProteinsRibonucleoproteinsAdenosineCarrier ProteinsPABPN1 protein, humanPAIP2 protein, humanPoly(A)-Binding Protein IpolyadenosinePolymersPuromycinRepressor ProteinsRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerRNA, Small Interfering

Identifiers

PMID22907758
PMCPMC3486150
OpenAlexW2104384770

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.