ArticleMethods in ecology and evolution2012
jPopGen Suite: population genetic analysis of DNA polymorphism from nucleotide sequences with errors.
Article in Methods in ecology and evolution, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
3 citing papers in PubMed.
- Properties of Samples With Segregating Polymerase Chain Reaction (PCR) Dropout Mutations Within a Species.Evolutionary bioinformatics online · 2019Article
- Population genomic analysis of 962 whole genome sequences of humans reveals natural selection in non-coding regions.PloS one · 2015Article
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Authors and funding
1 author.
Funding
Abstract
1. Next-generation sequencing (NGS) is being increasingly used in ecological and evolutionary studies. Though promising, NGS is known to be error-prone. Sequencing error can cause significant bias for population genetic analysis of a sequence sample.2. We present jPopGen Suite, an integrated tool for population genetic analysis of DNA polymorphisms from nucleotide sequences. It is specially designed for data with a non-negligible error rate, although it serves well for "error-free" data. It implements several methods for estimating the population mutation rate, population growth rate, and conducting neutrality tests.3. jPopGen Suite facilitates the population genetic analysis of NGS data in various applications, and is freely available for non-commercial users at http://sites.google.com/site/jpopgen/.
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Registered trials
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