Evidence map›Paper›PMID 22902740›Full record

ArticleDevelopmental cell2012

Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks.

Joo-Seop Park, Wenxiu Ma, Lori L O'Brien, Eunah Chung, Jin-Jin Guo, Jr-Gang Cheng, M Todd Valerius, Jill A McMahon, Wing Hung Wong, Andrew P McMahon

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 165 papers.

0numbers the graph read from it
0cells of the map it votes in
165citing papers in PubMed
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

165 citing papers in PubMed, 266 citations in OpenAlex.

  1. Epigenetic regulation of kidney development.Nature reviews. Nephrology · 2026
    Review
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  6. A knock inbioRxiv : the preprint server for biology · 2026
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105 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Joo-Seop ParkDivision of Pediatric Urology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA. joo-seop.park@cchmc.org
Wenxiu Ma
Lori L O'Brien
Eunah Chung
Jin-Jin Guo
Jr-Gang Cheng
M Todd Valerius
Jill A McMahon
Wing Hung Wong
Andrew P McMahon
Harvard University · USCincinnati Children's Hospital Medical Center · USStanford University · USBeth Israel Deaconess Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

Cell Interactions in Development of the Mammalian KidneyR37DK054364 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MCMAHON, ANDREW P. · 2008 to 2017
$7.0M
Cis-analysis of expression and ChIP data on Shh pathwayR01HG003903 · NHGRI · STANFORD UNIVERSITY · PI WONG, WING H. · 2006 to 2010
$2.5M
Statistical analysis of RNA-Seq dataR01HG005717 · NHGRI · STANFORD UNIVERSITY · PI WONG, WING H. · 2011 to 2013
$1.1M
Characterization of a novel protein required for glomerular podocyte functionF32DK085959 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI O'BRIEN, LORI L · 2010 to 2012
$153k
NHGRI NIH HHS R01 HG003903NHGRI NIH HHS R01 HG005717NIDDK NIH HHS F32 DK085959NIDDK NIH HHS R37 DK054364
6 · The paper itself

Abstract

A balance between Six2-dependent self-renewal and canonical Wnt signaling-directed commitment regulates mammalian nephrogenesis. Intersectional studies using chromatin immunoprecipitation and transcriptional profiling identified direct target genes shared by each pathway within nephron progenitors. Wnt4 and Fgf8 are essential for progenitor commitment; cis-regulatory modules flanking each gene are cobound by Six2 and β-catenin and are dependent on conserved Lef/Tcf binding sites for activity. In vitro and in vivo analyses suggest that Six2 and Lef/Tcf factors form a regulatory complex that promotes progenitor maintenance while entry of β-catenin into this complex promotes nephrogenesis. Alternative transcriptional responses associated with Six2 and β-catenin cobinding events occur through non-Lef/Tcf DNA binding mechanisms, highlighting the regulatory complexity downstream of Wnt signaling in the developing mammalian kidney.

Indexed as

Gene Regulatory NetworksWnt Signaling PathwayAnimalsbeta CateninCells, CulturedHomeodomain ProteinsMiceMice, TransgenicNephronsStem CellsTranscription Factorsbeta CateninCTNNB1 protein, mouseHomeodomain ProteinsSix2 protein, mouseTranscription Factors

Identifiers

PMID22902740
PMCPMC3892952
OpenAlexW1985623793

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.