Evidence map›Paper›PMID 22899713›Full record

ArticleJournal of cell science2012

PKA isoforms coordinate mRNA fate during nutrient starvation.

Vanesa Tudisca, Clare Simpson, Lydia Castelli, Jennifer Lui, Nathaniel Hoyle, Silvia Moreno, Mark Ashe, Paula Portela

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
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  7. Protein Kinases at the Intersection of Translation and Virulence.Frontiers in cellular and infection microbiology · 2019
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Vanesa TudiscaDepartamento de Química Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Argentina.
Clare Simpson
Lydia Castelli
Jennifer Lui
Nathaniel Hoyle
Silvia Moreno
Mark Ashe
Paula Portela
University of Manchester · GBUniversity of Buenos Aires · AR

Funding

Biotechnology and Biological Sciences Research Council BB/G012571/1NCIRD CDC HHS U66 IP000519Wellcome Trust 088141/Z/09/Z
6 · The paper itself

Abstract

A variety of stress conditions induce mRNA and protein aggregation into mRNA silencing foci, but the signalling pathways mediating these responses are still elusive. Previously we demonstrated that PKA catalytic isoforms Tpk2 and Tpk3 localise with processing and stress bodies in Saccharomyces cerevisiae. Here, we show that Tpk2 and Tpk3 are associated with translation initiation factors Pab1 and Rps3 in exponentially growing cells. Glucose starvation promotes the loss of interaction between Tpk and initiation factors followed by their accumulation into processing bodies. Analysis of mutants of the individual PKA isoform genes has revealed that the TPK3 or TPK2 deletion affects the capacity of the cells to form granules and arrest translation properly in response to glucose starvation or stationary phase. Moreover, we demonstrate that PKA controls Rpg1 and eIF4G(1) protein abundance, possibly controlling cap-dependent translation. Taken together, our data suggest that the PKA pathway coordinates multiple stages in the fate of mRNAs in association with nutritional environment and growth status of the cell.

Indexed as

Culture MediaCyclic AMP-Dependent Protein Kinase Catalytic SubunitsCyclic AMP-Dependent Protein KinasesCytoplasmic GranulesEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4GGene Expression Regulation, FungalGlucoseIsoenzymesPeptide Chain Initiation, TranslationalPoly(A)-Binding ProteinsProtein SubunitsProtein TransportRibosomal ProteinsRNA, MessengerSaccharomyces cerevisiaeCulture MediaCyclic AMP-Dependent Protein Kinase Catalytic SubunitsCyclic AMP-Dependent Protein KinasesEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4GGlucoseIsoenzymespab1 protein, S cerevisiaePoly(A)-Binding ProteinsProtein SubunitsRibosomal ProteinsRNA, MessengerRPG1 protein, S cerevisiaeRPS3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTIF4631 protein, S cerevisiaeTpk1 protein, S cerevisiaeTPK2 protein, S cerevisiaeTpk3 protein, S cerevisiae

Identifiers

PMID22899713
PMCPMC3533396
OpenAlexW2067794369

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.